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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034095 through 18771 annotations produced 1 hits



(CG15701):

Annotation Number : CG15701
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034095
Gbrowse : chr2R:12117721-12121591 (+) // 100.0 //
Probeset : 1639248_at
Accessions : protein= NP_611100;, nucleotide= NM_137256;
FlyMine data for FBgn0034095.
BDGP gene expression has embryonic in situ data for CG15701: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0034095 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain12 ± 03 of 4 1.60None
Head15 ± 33 of 4 2.00None
Eye8 ± 10 of 4 1.06None
Thoracicoabdominal ganglion20 ± 23 of 4 2.50Up
Salivary gland41 ± 34 of 4 5.26Up
Crop23 ± 22 of 4 3.00Up
Midgut3 ± 10 of 4 0.40None
Tubule19 ± 02 of 4 2.40Up
Hindgut19 ± 11 of 4 2.50Up
Heart12 ± 21 of 4 1.53None
Fat body5 ± 41 of 4 0.74None
Ovary3 ± 00 of 4 0.40None
Testis2 ± 10 of 4 0.30None
Male accessory glands2 ± 00 of 4 0.30None
Virgin spermatheca3 ± 20 of 4 0.45None
Mated spermatheca2 ± 10 of 4 0.35None
Adult carcass10 ± 50 of 4 1.40None
Larval CNS2 ± 10 of 4 0.36None
Larval Salivary gland14 ± 22 of 4 1.81None
Larval midgut2 ± 10 of 4 0.34None
Larval tubule34 ± 34 of 4 4.30Up
Larval hindgut20 ± 23 of 4 2.60Up
Larval fat body3 ± 00 of 4 0.40None
Larval trachea6 ± 50 of 4 0.85None
Larval carcass10 ± 10 of 4 1.37None
S2 cells (growing)4 ± 10 of 4 0.63None
Whole fly7 ± 20 of 4

Looking for FBgn0034095. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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