Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034098 through 18771 annotations produced 1 hits



CG15707 (krimp):

Annotation Number : CG15707
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034098
Gbrowse : chr2R:12125605-12128222 (-) // 100.0 //
Probeset : 1636625_at
Accessions : protein= NP_611103;, nucleotide= NM_137259;
Pathway : 0043186 // P granule // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direc
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0034098.
BioGrid reports that CG15707 interacts with CG9924 CG3265 CG4896 CG9083 .
TRiP has 3 RNAi stocks for FBgn0034098 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 10 of 4 0.00Down
Head2 00 of 4 0.00Down
Eye4 00 of 4 0.03Down
Thoracicoabdominal ganglion6 11 of 4 0.00Down
Salivary gland12 00 of 4 0.07Down
Crop11 13 of 4 0.10Down
Midgut6 10 of 4 0.00Down
Tubule8 20 of 4 0.00Down
Hindgut5 01 of 4 0.00Down
Heart5 10 of 4 0.03Down
Fat body9 41 of 4 0.05Down
Ovary580 14 of 4 3.10Up
Testis98 44 of 4 0.50Down
Male accessory glands3 10 of 4 0.00Down
Virgin spermatheca11 03 of 4 0.06Down
Mated spermatheca9 21 of 4 0.05Down
Adult carcass15 11 of 4 0.10Down
Larval CNS7 24 of 4 0.04Down
Larval Salivary gland4 11 of 4 0.02Down
Larval midgut6 10 of 4 0.03Down
Larval tubule7 00 of 4 0.00Down
Larval hindgut5 10 of 4 0.03Down
Larval fat body27 64 of 4 0.10Down
Larval trachea26 74 of 4 0.14Down
Larval carcass1 00 of 4 0.01Down
S2 cells (growing)487 114 of 4 2.61Up
Whole fly187 104 of 4

Looking for FBgn0034098. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime