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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034103 through 18771 annotations produced 1 hits



(CG15704):

Annotation Number : CG15704
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034103
Gbrowse : chr2R:12167518-12167978 (+) // 100.0 //
Probeset : 1628430_at
Accessions : protein= NP_611108;, nucleotide= NM_137264;
Interpro : 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred fr
FlyMine data for FBgn0034103.
VDRC has 1 RNAi stocks for FBgn0034103 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain238 ± 34 of 416.90Up
Head57 ± 44 of 4 4.10Up
Eye11 ± 20 of 4 0.81None
Thoracicoabdominal ganglion133 ± 54 of 4 9.50Up
Salivary gland31 ± 60 of 4 2.21None
Crop5 ± 30 of 4 0.40None
Midgut20 ± 10 of 4 1.40None
Tubule3 ± 00 of 4 0.20Down
Hindgut1 ± 00 of 4 0.10Down
Heart5 ± 10 of 4 0.37None
Fat body10 ± 41 of 4 0.77None
Ovary3 ± 10 of 4 0.30None
Testis5 ± 10 of 4 0.40None
Male accessory glands2 ± 00 of 4 0.20None
Virgin spermatheca6 ± 10 of 4 0.46None
Mated spermatheca4 ± 10 of 4 0.34None
Adult carcass3 ± 00 of 4 0.30None
Larval CNS92 ± 94 of 4 6.54Up
Larval Salivary gland20 ± 30 of 4 1.45None
Larval midgut14 ± 30 of 4 1.00None
Larval tubule8 ± 30 of 4 0.60None
Larval hindgut5 ± 10 of 4 0.37None
Larval fat body8 ± 10 of 4 0.60None
Larval trachea3 ± 20 of 4 0.25None
Larval carcass3 ± 00 of 4 0.23None
S2 cells (growing)6 ± 20 of 4 0.47None
Whole fly14 ± 30 of 4

Looking for FBgn0034103. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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