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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034122 through 18771 annotations produced 1 hits



(CG15711):

Annotation Number : CG15711
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034122
Gbrowse : chr2R:12251148-12251812 (-) // 100.0 //
Probeset : 1632714_at
Accessions : protein= NP_611124;, nucleotide= NM_137280;
FlyMine data for FBgn0034122.
VDRC has 3 RNAi stocks for FBgn0034122 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.00Down
Head4 ± 20 of 4 0.10Down
Eye5 ± 00 of 4 0.10Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.10Down
Salivary gland11 ± 40 of 4 0.22Down
Crop4 ± 10 of 4 0.10Down
Midgut1 ± 00 of 4 0.00Down
Tubule5 ± 10 of 4 0.10Down
Hindgut4 ± 00 of 4 0.10Down
Heart78 ± 94 of 4 1.58Up
Fat body94 ± 14 of 4 1.88Up
Ovary1 ± 00 of 4 0.00Down
Testis538 ± 144 of 410.80Up
Male accessory glands6 ± 20 of 4 0.10Down
Virgin spermatheca5 ± 10 of 4 0.10Down
Mated spermatheca6 ± 20 of 4 0.13Down
Adult carcass71 ± 54 of 4 1.40Up
Larval CNS1 ± 10 of 4 0.03Down
Larval Salivary gland5 ± 00 of 4 0.12Down
Larval midgut2 ± 10 of 4 0.05Down
Larval tubule6 ± 10 of 4 0.10Down
Larval hindgut3 ± 10 of 4 0.07Down
Larval fat body43 ± 83 of 4 0.90None
Larval trachea4 ± 31 of 4 0.09Down
Larval carcass25 ± 23 of 4 0.51Down
S2 cells (growing)2 ± 10 of 4 0.05Down
Whole fly50 ± 34 of 4

Looking for FBgn0034122. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime