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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034131 through 18771 annotations produced 1 hits



(CG15712):

Annotation Number : CG15712
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034131
Gbrowse : chr2R:12372345-12373045 (-) // 100.0 //
Probeset : 1625380_at
Accessions : protein= NP_611131;, nucleotide= NM_137287;
FlyMine data for FBgn0034131.
VDRC has 3 RNAi stocks for FBgn0034131 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 00 of 4 0.80None
Head4 11 of 4 0.90None
Eye3 10 of 4 0.59None
Thoracicoabdominal ganglion1 00 of 4 0.30Down
Salivary gland9 30 of 4 1.70None
Crop4 22 of 4 0.80None
Midgut6 10 of 4 1.20None
Tubule2 00 of 4 0.40Down
Hindgut2 10 of 4 0.50None
Heart0 00 of 4 0.10Down
Fat body9 50 of 4 1.71None
Ovary1 00 of 4 0.20Down
Testis1 00 of 4 0.20Down
Male accessory glands5 30 of 4 1.10None
Virgin spermatheca2 00 of 4 0.38Down
Mated spermatheca3 10 of 4 0.58None
Adult carcass2 00 of 4 0.40Down
Larval CNS2 10 of 4 0.42Down
Larval Salivary gland3 00 of 4 0.55None
Larval midgut2 00 of 4 0.39Down
Larval tubule2 10 of 4 0.50None
Larval hindgut2 10 of 4 0.54None
Larval fat body6 10 of 4 1.30None
Larval trachea2 10 of 4 0.50Down
Larval carcass2 00 of 4 0.44Down
S2 cells (growing)5 20 of 4 1.10None
Whole fly5 00 of 4

Looking for FBgn0034131. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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