Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034138 through 18771 annotations produced 1 hits



Ribosomal protein S15 (RpS15):

Annotation Number : CG8332
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034138
Gbrowse : chr2R:12457615-12458742 (-) // 100.0 //
Probeset : 1625425_a_at
Accessions : protein= NP_611136; /// NP_725591;, nucleotide= NM_137292; /// NM_166183;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // infer
FlyMine data for FBgn0034138.
BDGP gene expression has embryonic in situ data for CG8332: 8 pix of staining in 1 body parts.
BioGrid reports that CG8332 interacts with CG9797 .
TRiP has 1 RNAi stocks for FBgn0034138 available for purchase.
VDRC has 3 RNAi stocks for FBgn0034138 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2660 ± 684 of 4 0.70Down
Head4263 ± 1974 of 4 1.20None
Eye5651 ± 1024 of 4 1.56Up
Thoracicoabdominal ganglion3867 ± 774 of 4 1.10None
Salivary gland13489 ± 11464 of 4 3.73Up
Crop5617 ± 2914 of 4 1.60Up
Midgut4960 ± 904 of 4 1.40Up
Tubule3553 ± 484 of 4 1.00None
Hindgut4578 ± 1204 of 4 1.30Up
Heart6035 ± 4424 of 4 1.67Up
Fat body5054 ± 7514 of 4 1.40Up
Ovary3090 ± 44 of 4 0.90None
Testis1095 ± 94 of 4 0.30Down
Male accessory glands8559 ± 2764 of 4 2.40Up
Virgin spermatheca4793 ± 1904 of 4 1.33Up
Mated spermatheca4877 ± 1534 of 4 1.35Up
Adult carcass5686 ± 2644 of 4 1.60Up
Larval CNS2437 ± 2094 of 4 0.67Down
Larval Salivary gland7483 ± 3364 of 4 2.07Up
Larval midgut4435 ± 1764 of 4 1.23Up
Larval tubule4706 ± 614 of 4 1.30Up
Larval hindgut3969 ± 714 of 4 1.10None
Larval fat body7274 ± 8024 of 4 2.00Up
Larval trachea5632 ± 2394 of 4 1.56Up
Larval carcass4511 ± 2844 of 4 1.25Up
S2 cells (growing)4159 ± 1204 of 4 1.15None
Whole fly3612 ± 1924 of 4

Looking for FBgn0034138. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime