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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034153 through 18771 annotations produced 1 hits



Acp53C14b (Acp53C14b):

Annotation Number : CG15616
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034153
Gbrowse : chr2R:12636471-12636926 (-) // 100.0 //
Probeset : 1623272_at
Accessions : protein= NP_611153;, nucleotide= NM_137309;
FlyMine data for FBgn0034153.
VDRC has 3 RNAi stocks for FBgn0034153 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head0 ± 00 of 4 0.00Down
Eye1 ± 00 of 4 0.00Down
Thoracicoabdominal ganglion3 ± 10 of 4 0.00Down
Salivary gland6 ± 30 of 4 0.00Down
Crop0 ± 00 of 4 0.00Down
Midgut0 ± 00 of 4 0.00Down
Tubule1 ± 00 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart2 ± 10 of 4 0.00Down
Fat body4 ± 30 of 4 0.00Down
Ovary10 ± 101 of 4 0.00Down
Testis143 ± 673 of 4 0.10Down
Male accessory glands10233 ± 3634 of 4 5.90Up
Virgin spermatheca4 ± 10 of 4 0.00Down
Mated spermatheca4 ± 10 of 4 0.00Down
Adult carcass250 ± 873 of 4 0.10Down
Larval CNS0 ± 00 of 4 0.00Down
Larval Salivary gland1 ± 00 of 4 0.00Down
Larval midgut4 ± 20 of 4 0.00Down
Larval tubule0 ± 00 of 4 0.00Down
Larval hindgut0 ± 00 of 4 0.00Down
Larval fat body0 ± 00 of 4 0.00Down
Larval trachea4 ± 70 of 4 0.00Down
Larval carcass1 ± 00 of 4 0.00Down
S2 cells (growing)0 ± 00 of 4 0.00Down
Whole fly1732 ± 2034 of 4

Looking for FBgn0034153. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime