Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034173 through 18771 annotations produced 1 hits



(CG9010):

Annotation Number : CG9010
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034173
Gbrowse : chr2R:12846447-12847652 (-) // 100.0 //
Probeset : 1634981_at
Accessions : protein= NP_611172;, nucleotide= NM_137328;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004365 // glyceraldehyde-3-phosphate dehydroge
FlyMine data for FBgn0034173.
BDGP gene expression has embryonic in situ data for CG9010: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0034173 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 10 of 4 0.10Down
Head1 00 of 4 0.00Down
Eye1 00 of 4 0.02Down
Thoracicoabdominal ganglion2 00 of 4 0.00Down
Salivary gland1 00 of 4 0.02Down
Crop3 10 of 4 0.00Down
Midgut8 20 of 4 0.10Down
Tubule4 00 of 4 0.00Down
Hindgut3 10 of 4 0.00Down
Heart4 01 of 4 0.05Down
Fat body2 10 of 4 0.03Down
Ovary2 00 of 4 0.00Down
Testis1034 484 of 412.50Up
Male accessory glands2 00 of 4 0.00Down
Virgin spermatheca7 20 of 4 0.09Down
Mated spermatheca11 11 of 4 0.14Down
Adult carcass7 20 of 4 0.10Down
Larval CNS2 10 of 4 0.04Down
Larval Salivary gland6 10 of 4 0.08Down
Larval midgut8 00 of 4 0.10Down
Larval tubule5 10 of 4 0.10Down
Larval hindgut4 10 of 4 0.06Down
Larval fat body128 664 of 4 1.50None
Larval trachea4 51 of 4 0.06Down
Larval carcass4 10 of 4 0.06Down
S2 cells (growing)6 20 of 4 0.07Down
Whole fly82 44 of 4

Looking for FBgn0034173. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime