Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034182 through 18771 annotations produced 1 hits



(CG9640):

Annotation Number : CG9640
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034182
Gbrowse : chr2R:12932460-12934273 (+) // 100.0 //
Probeset : 1637103_at
Accessions : protein= NP_611181;, nucleotide= NM_137337;
FlyMine data for FBgn0034182.
VDRC has 4 RNAi stocks for FBgn0034182 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain28 ± 24 of 4 0.90None
Head38 ± 44 of 4 1.20None
Eye28 ± 24 of 4 0.92None
Thoracicoabdominal ganglion24 ± 14 of 4 0.80None
Salivary gland44 ± 44 of 4 1.40None
Crop40 ± 24 of 4 1.30Up
Midgut32 ± 24 of 4 1.00None
Tubule30 ± 14 of 4 1.00None
Hindgut49 ± 24 of 4 1.60Up
Heart21 ± 24 of 4 0.70Down
Fat body21 ± 54 of 4 0.69Down
Ovary11 ± 03 of 4 0.40Down
Testis7 ± 02 of 4 0.20Down
Male accessory glands30 ± 14 of 4 1.00None
Virgin spermatheca41 ± 24 of 4 1.30Up
Mated spermatheca29 ± 14 of 4 0.95None
Adult carcass87 ± 124 of 4 2.80Up
Larval CNS27 ± 04 of 4 0.89None
Larval Salivary gland27 ± 34 of 4 0.86None
Larval midgut36 ± 34 of 4 1.16None
Larval tubule48 ± 24 of 4 1.50Up
Larval hindgut31 ± 24 of 4 0.99None
Larval fat body36 ± 24 of 4 1.20None
Larval trachea30 ± 44 of 4 0.96None
Larval carcass44 ± 24 of 4 1.41Up
S2 cells (growing)38 ± 14 of 4 1.24None
Whole fly31 ± 24 of 4

Looking for FBgn0034182. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime