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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034210 through 18771 annotations produced 1 hits



(CG6568):

Annotation Number : CG6568
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034210
Gbrowse : chr2R:13292808-13294930 (-) // 100.0 //
Probeset : 1635596_at
Accessions : protein= NP_611204;, nucleotide= NM_137360;
FlyMine data for FBgn0034210.
BDGP gene expression has embryonic in situ data for CG6568: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0034210 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain91 ± 24 of 4 0.70Down
Head56 ± 54 of 4 0.50Down
Eye52 ± 44 of 4 0.43Down
Thoracicoabdominal ganglion73 ± 24 of 4 0.60Down
Salivary gland208 ± 94 of 4 1.72Up
Crop73 ± 34 of 4 0.60Down
Midgut61 ± 34 of 4 0.50Down
Tubule88 ± 34 of 4 0.70Down
Hindgut89 ± 14 of 4 0.70Down
Heart46 ± 54 of 4 0.38Down
Fat body42 ± 84 of 4 0.35Down
Ovary212 ± 34 of 4 1.70Up
Testis228 ± 44 of 4 1.90Up
Male accessory glands69 ± 34 of 4 0.60Down
Virgin spermatheca59 ± 34 of 4 0.49Down
Mated spermatheca66 ± 44 of 4 0.55Down
Adult carcass44 ± 24 of 4 0.40Down
Larval CNS100 ± 64 of 4 0.83Down
Larval Salivary gland164 ± 54 of 4 1.35Up
Larval midgut25 ± 14 of 4 0.21Down
Larval tubule77 ± 24 of 4 0.60Down
Larval hindgut64 ± 54 of 4 0.53Down
Larval fat body87 ± 174 of 4 0.70None
Larval trachea59 ± 24 of 4 0.49Down
Larval carcass36 ± 24 of 4 0.30Down
S2 cells (growing)89 ± 34 of 4 0.74Down
Whole fly121 ± 24 of 4

Looking for FBgn0034210. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime