FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034218 through 18771 annotations produced 1 hits

(CG18467):

Annotation Number : CG18467
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034218
Gbrowse : chr2R:13328108-13329994 (+) // 100.0 //
Probeset : 1641041_at
Accessions : protein= NP_611211;, nucleotide= NM_137367;
FlyMine data for FBgn0034218.
BDGP gene expression has embryonic in situ data for CG18467: 8 pix of staining in 1 body parts.
VDRC has 6 RNAi stocks for FBgn0034218 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	415 ± 16	4 of 4	63.10	Up
Head	73 ± 10	4 of 4	11.10	Up
Eye	18 ± 1	4 of 4	2.78	Up
Thoracicoabdominal ganglion	176 ± 5	4 of 4	26.80	Up
Salivary gland	10 ± 3	0 of 4	1.56	None
Crop	4 ± 0	0 of 4	0.70	None
Midgut	5 ± 1	0 of 4	0.90	None
Tubule	4 ± 0	0 of 4	0.60	Down
Hindgut	4 ± 1	0 of 4	0.60	None
Heart	2 ± 0	0 of 4	0.36	Down
Fat body	9 ± 5	2 of 4	1.50	None
Ovary	2 ± 0	0 of 4	0.30	Down
Testis	2 ± 0	0 of 4	0.40	Down
Male accessory glands	3 ± 1	0 of 4	0.50	None
Virgin spermatheca	3 ± 1	0 of 4	0.47	None
Mated spermatheca	4 ± 1	0 of 4	0.64	None
Adult carcass	11 ± 2	0 of 4	1.80	None
Larval CNS	41 ± 5	4 of 4	6.33	Up
Larval Salivary gland	4 ± 1	0 of 4	0.63	None
Larval midgut	4 ± 0	0 of 4	0.63	None
Larval tubule	4 ± 1	0 of 4	0.60	None
Larval hindgut	3 ± 1	0 of 4	0.56	None
Larval fat body	3 ± 1	0 of 4	0.60	None
Larval trachea	5 ± 1	0 of 4	0.79	None
Larval carcass	3 ± 0	0 of 4	0.52	None
S2 cells (growing)	3 ± 1	0 of 4	0.59	None
Whole fly	6 ± 1	2 of 4

Looking for FBgn0034218. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720