Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034245 through 18771 annotations produced 1 hits



Ubiquinol-cytochrome c oxidoreductase 6.4 kDa (CG14482):

Annotation Number : CG14482
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034245
Gbrowse : chr2R:13459831-13460259 (-) // 100.0 //
Probeset : 1640491_at
Accessions : protein= NP_611233;, nucleotide= NM_137389;
Pathway : ubiquinol to cytochrome c // inferred from sequence or structural similarity /// 0006122 // mitochondrial electron tran
Interpro : ubiquinol to cytochrome c // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from el
FlyMine data for FBgn0034245.
BDGP gene expression has embryonic in situ data for CG14482: 12 pix of staining in 14 body parts.
BioGrid reports that CG14482 interacts with CG15220 .
VDRC has 2 RNAi stocks for FBgn0034245 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1966 694 of 4 0.80None
Head2714 1144 of 4 1.10None
Eye3334 674 of 4 1.40Up
Thoracicoabdominal ganglion2653 684 of 4 1.10None
Salivary gland6023 1494 of 4 2.52Up
Crop2789 2144 of 4 1.20None
Midgut2299 894 of 4 1.00None
Tubule3608 854 of 4 1.50Up
Hindgut3119 1114 of 4 1.30Up
Heart3324 2004 of 4 1.39Up
Fat body2835 2744 of 4 1.19Up
Ovary1386 254 of 4 0.60Down
Testis633 74 of 4 0.30Down
Male accessory glands2208 944 of 4 0.90None
Virgin spermatheca2443 1064 of 4 1.02None
Mated spermatheca2430 1094 of 4 1.02None
Adult carcass4321 2704 of 4 1.80Up
Larval CNS1297 1064 of 4 0.54Down
Larval Salivary gland2953 994 of 4 1.24Up
Larval midgut2118 714 of 4 0.89None
Larval tubule1987 1124 of 4 0.80Down
Larval hindgut2386 624 of 4 1.00None
Larval fat body950 514 of 4 0.40Down
Larval trachea1624 1384 of 4 0.68Down
Larval carcass2394 2324 of 4 1.00None
S2 cells (growing)1324 534 of 4 0.56Down
Whole fly2385 1144 of 4

Looking for FBgn0034245. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime