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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034284 through 18771 annotations produced 1 hits



(CG14491):

Annotation Number : CG14491
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034284
Gbrowse : chr2R:13782582-13783083 (+) // 100.0 //
Probeset : 1631539_at
Accessions : protein= NP_611276;, nucleotide= NM_137432;
FlyMine data for FBgn0034284.
VDRC has 3 RNAi stocks for FBgn0034284 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 11 of 4 2.50Up
Head5 00 of 4 2.70Up
Eye1 00 of 4 0.87None
Thoracicoabdominal ganglion6 01 of 4 3.50Up
Salivary gland12 40 of 4 6.79None
Crop5 21 of 4 2.90None
Midgut2 10 of 4 1.40None
Tubule2 00 of 4 1.50None
Hindgut4 10 of 4 2.20None
Heart1 00 of 4 0.97None
Fat body3 20 of 4 1.85None
Ovary2 00 of 4 1.40None
Testis4 00 of 4 2.30Up
Male accessory glands8 30 of 4 4.40None
Virgin spermatheca1 00 of 4 0.85None
Mated spermatheca2 10 of 4 1.05None
Adult carcass5 20 of 4 2.90None
Larval CNS2 00 of 4 1.49None
Larval Salivary gland5 10 of 4 2.67None
Larval midgut4 10 of 4 2.41None
Larval tubule3 11 of 4 2.00None
Larval hindgut3 10 of 4 1.87None
Larval fat body6 21 of 4 3.20None
Larval trachea3 20 of 4 1.96None
Larval carcass5 11 of 4 2.91None
S2 cells (growing)4 10 of 4 2.48None
Whole fly1 00 of 4

Looking for FBgn0034284. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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