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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034292 through 18771 annotations produced 1 hits



(CG5767):

Annotation Number : CG5767
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034292
Gbrowse : chr2R:13933940-13934967 (-) // 100.0 //
Probeset : 1633532_at
Accessions : protein= NP_611283;, nucleotide= NM_137439;
FlyMine data for FBgn0034292.
VDRC has 3 RNAi stocks for FBgn0034292 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 20 of 4 0.00None
Head4 ± 20 of 4 0.00None
Eye2 ± 00 of 4 0.01None
Thoracicoabdominal ganglion5 ± 20 of 4 0.00None
Salivary gland8 ± 20 of 4 0.04None
Crop2 ± 00 of 4 0.00None
Midgut3665 ± 914 of 415.50Up
Tubule4 ± 10 of 4 0.00Down
Hindgut3 ± 10 of 4 0.00None
Heart1 ± 00 of 4 0.00None
Fat body1 ± 00 of 4 0.01None
Ovary2 ± 00 of 4 0.00None
Testis4 ± 10 of 4 0.00None
Male accessory glands8 ± 20 of 4 0.00None
Virgin spermatheca2 ± 00 of 4 0.01None
Mated spermatheca1 ± 00 of 4 0.00None
Adult carcass3 ± 10 of 4 0.00None
Larval CNS4 ± 30 of 4 0.02None
Larval Salivary gland4 ± 10 of 4 0.02None
Larval midgut5235 ± 2534 of 422.21Up
Larval tubule5 ± 10 of 4 0.00None
Larval hindgut5 ± 20 of 4 0.02None
Larval fat body5 ± 20 of 4 0.00None
Larval trachea1 ± 00 of 4 0.00None
Larval carcass5 ± 10 of 4 0.02None
S2 cells (growing)5 ± 10 of 4 0.02None
Whole fly235 ± 854 of 4

Looking for FBgn0034292. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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