FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034293 through 18771 annotations produced 1 hits

(CG14495):

Annotation Number : CG14495
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034293
Gbrowse : chr2R:13936545-13937103 (-) // 100.0 //
Probeset : 1636005_at
Accessions : protein= NP_611284;, nucleotide= NM_137440;
FlyMine data for FBgn0034293.
VDRC has 2 RNAi stocks for FBgn0034293 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.00	Down
Head	75 ± 6	4 of 4	0.90	None
Eye	467 ± 12	4 of 4	5.37	Up
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.00	Down
Salivary gland	13 ± 5	0 of 4	0.16	Down
Crop	4 ± 1	0 of 4	0.00	Down
Midgut	752 ± 52	4 of 4	8.60	Up
Tubule	16 ± 2	3 of 4	0.20	Down
Hindgut	256 ± 10	4 of 4	2.90	Up
Heart	6 ± 0	2 of 4	0.07	Down
Fat body	7 ± 3	0 of 4	0.09	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	1 ± 0	0 of 4	0.00	Down
Male accessory glands	9 ± 3	0 of 4	0.10	Down
Virgin spermatheca	9 ± 1	0 of 4	0.11	Down
Mated spermatheca	8 ± 0	0 of 4	0.10	Down
Adult carcass	6 ± 3	0 of 4	0.10	Down
Larval CNS	0 ± 0	0 of 4	0.01	Down
Larval Salivary gland	2 ± 0	0 of 4	0.02	Down
Larval midgut	247 ± 17	4 of 4	2.84	Up
Larval tubule	6 ± 0	0 of 4	0.10	Down
Larval hindgut	7 ± 3	2 of 4	0.09	Down
Larval fat body	5 ± 1	0 of 4	0.10	Down
Larval trachea	10 ± 9	1 of 4	0.12	Down
Larval carcass	7 ± 1	0 of 4	0.08	Down
S2 cells (growing)	2 ± 0	0 of 4	0.03	Down
Whole fly	87 ± 14	4 of 4

Looking for FBgn0034293. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720