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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0034324 through 18771 annotations produced 1 hits


Annotation Number : CG18538
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034324
Gbrowse : chr2R:14184910-14185256 (+) // 99.43 //
Probeset : 1638589_at
Accessions : protein= NP_611314;, nucleotide= NM_137470;
FlyMine data for FBgn0034324.
BioGrid reports that CG18538 interacts with CG9986 .
VDRC has 3 RNAi stocks for FBgn0034324 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.40None
Head1 00 of 4 0.30None
Eye1 00 of 4 0.39None
Thoracicoabdominal ganglion1 00 of 4 0.50None
Salivary gland2 00 of 4 0.63None
Crop2 10 of 4 0.70None
Midgut1 00 of 4 0.30None
Tubule3 00 of 4 0.90None
Hindgut0 00 of 4 0.20None
Heart1 00 of 4 0.30None
Fat body1 00 of 4 0.28None
Ovary0 00 of 4 0.20None
Testis1 00 of 4 0.30None
Male accessory glands1 00 of 4 0.50None
Virgin spermatheca0 00 of 4 0.24None
Mated spermatheca2 00 of 4 0.57None
Adult carcass31 64 of 4 8.40Up
Larval CNS1 10 of 4 0.47None
Larval Salivary gland3 00 of 4 0.83None
Larval midgut1 00 of 4 0.31None
Larval tubule0 00 of 4 0.20None
Larval hindgut0 00 of 4 0.22None
Larval fat body1 00 of 4 0.50None
Larval trachea3 20 of 4 1.01None
Larval carcass1 00 of 4 0.41None
S2 cells (growing)1 10 of 4 0.51None
Whole fly3 10 of 4

Looking for FBgn0034324. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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