FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034324 through 18771 annotations produced 1 hits

(CG18538):

Annotation Number : CG18538
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034324
Gbrowse : chr2R:14184910-14185256 (+) // 99.43 //
Probeset : 1638589_at
Accessions : protein= NP_611314;, nucleotide= NM_137470;
FlyMine data for FBgn0034324.
BioGrid reports that CG18538 interacts with CG9986 .
VDRC has 3 RNAi stocks for FBgn0034324 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.40	None
Head	1 ± 0	0 of 4	0.30	None
Eye	1 ± 0	0 of 4	0.39	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.50	None
Salivary gland	2 ± 0	0 of 4	0.63	None
Crop	2 ± 1	0 of 4	0.70	None
Midgut	1 ± 0	0 of 4	0.30	None
Tubule	3 ± 0	0 of 4	0.90	None
Hindgut	0 ± 0	0 of 4	0.20	None
Heart	1 ± 0	0 of 4	0.30	None
Fat body	1 ± 0	0 of 4	0.28	None
Ovary	0 ± 0	0 of 4	0.20	None
Testis	1 ± 0	0 of 4	0.30	None
Male accessory glands	1 ± 0	0 of 4	0.50	None
Virgin spermatheca	0 ± 0	0 of 4	0.24	None
Mated spermatheca	2 ± 0	0 of 4	0.57	None
Adult carcass	31 ± 6	4 of 4	8.40	Up
Larval CNS	1 ± 1	0 of 4	0.47	None
Larval Salivary gland	3 ± 0	0 of 4	0.83	None
Larval midgut	1 ± 0	0 of 4	0.31	None
Larval tubule	0 ± 0	0 of 4	0.20	None
Larval hindgut	0 ± 0	0 of 4	0.22	None
Larval fat body	1 ± 0	0 of 4	0.50	None
Larval trachea	3 ± 2	0 of 4	1.01	None
Larval carcass	1 ± 0	0 of 4	0.41	None
S2 cells (growing)	1 ± 1	0 of 4	0.51	None
Whole fly	3 ± 1	0 of 4

Looking for FBgn0034324. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720