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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034327 through 18771 annotations produced 1 hits



(CG14505):

Annotation Number : CG14505
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034327
Gbrowse : chr2R:14190449-14191482 (-) // 100.0 //
Probeset : 1623657_at
Accessions : protein= NP_001036558;, nucleotide= NM_001043093;
FlyMine data for FBgn0034327.
VDRC has 2 RNAi stocks for FBgn0034327 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.30None
Head0 ± 00 of 4 0.40None
Eye2 ± 10 of 4 0.97None
Thoracicoabdominal ganglion1 ± 00 of 4 0.40None
Salivary gland3 ± 00 of 4 1.28None
Crop0 ± 00 of 4 0.30None
Midgut1 ± 00 of 4 0.40None
Tubule1 ± 00 of 4 0.70Down
Hindgut0 ± 00 of 4 0.30None
Heart0 ± 00 of 4 0.33None
Fat body0 ± 00 of 4 0.33None
Ovary0 ± 00 of 4 0.30None
Testis46 ± 44 of 419.40Up
Male accessory glands3 ± 20 of 4 1.40None
Virgin spermatheca1 ± 00 of 4 0.52None
Mated spermatheca2 ± 10 of 4 0.96None
Adult carcass1 ± 00 of 4 0.80None
Larval CNS0 ± 00 of 4 0.35None
Larval Salivary gland1 ± 00 of 4 0.65None
Larval midgut0 ± 00 of 4 0.32None
Larval tubule1 ± 00 of 4 0.50None
Larval hindgut0 ± 00 of 4 0.24None
Larval fat body3 ± 10 of 4 1.50None
Larval trachea1 ± 00 of 4 0.45None
Larval carcass0 ± 00 of 4 0.39None
S2 cells (growing)1 ± 00 of 4 0.48None
Whole fly2 ± 10 of 4

Looking for FBgn0034327. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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