Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034365 through 18771 annotations produced 1 hits



/// Protein-1 (CG5335 /// Fbp1):

Annotation Number : CG5335
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034365
Gbrowse : chr2R:14509049-14510475 (+) // 100.0 //
Probeset : 1631627_at
Accessions : protein= NP_611349;, nucleotide= NM_137505;
Pathway : 0005811 // lipid particle // inferred from direct assay
Interpro : 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005529 // sugar binding // inferred f
FlyMine data for FBgn0034365.
VDRC has 2 RNAi stocks for FBgn0034365 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain54 ± 34 of 4 0.30Down
Head141 ± 64 of 4 0.70Down
Eye148 ± 54 of 4 0.70Down
Thoracicoabdominal ganglion61 ± 44 of 4 0.30Down
Salivary gland840 ± 154 of 4 3.98Up
Crop479 ± 254 of 4 2.30Up
Midgut1099 ± 544 of 4 5.20Up
Tubule868 ± 594 of 4 4.10Up
Hindgut638 ± 274 of 4 3.00Up
Heart257 ± 294 of 4 1.22None
Fat body189 ± 314 of 4 0.90None
Ovary211 ± 74 of 4 1.00None
Testis25 ± 04 of 4 0.10Down
Male accessory glands491 ± 254 of 4 2.30Up
Virgin spermatheca299 ± 74 of 4 1.42Up
Mated spermatheca264 ± 64 of 4 1.25Up
Adult carcass122 ± 64 of 4 0.60Down
Larval CNS16 ± 24 of 4 0.08Down
Larval Salivary gland775 ± 564 of 4 3.67Up
Larval midgut1016 ± 1724 of 4 4.81Up
Larval tubule534 ± 324 of 4 2.50Up
Larval hindgut909 ± 1754 of 4 4.31Up
Larval fat body85 ± 124 of 4 0.40Down
Larval trachea172 ± 84 of 4 0.82Down
Larval carcass93 ± 124 of 4 0.44Down
S2 cells (growing)308 ± 24 of 4 1.46Up
Whole fly211 ± 124 of 4

Looking for FBgn0034365. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime