Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034398 through 18771 annotations produced 1 hits



(CG15098):

Annotation Number : CG15098
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034398
Gbrowse : chr2R:14721023-14722260 (-) // 100.0 //
Probeset : 1627634_at
Accessions : protein= NP_611379;, nucleotide= NM_137535;
FlyMine data for FBgn0034398.
BioGrid reports that CG15098 interacts with CG3379 .
VDRC has 1 RNAi stocks for FBgn0034398 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain989 ± 214 of 4 0.80Down
Head1974 ± 724 of 4 1.60Up
Eye2275 ± 924 of 4 1.88Up
Thoracicoabdominal ganglion959 ± 204 of 4 0.80Down
Salivary gland4362 ± 1084 of 4 3.61Up
Crop2665 ± 784 of 4 2.20Up
Midgut3076 ± 484 of 4 2.50Up
Tubule2857 ± 324 of 4 2.40Up
Hindgut2707 ± 244 of 4 2.20Up
Heart3474 ± 2294 of 4 2.88Up
Fat body2588 ± 1674 of 4 2.14Up
Ovary934 ± 174 of 4 0.80Down
Testis533 ± 144 of 4 0.40Down
Male accessory glands2892 ± 1074 of 4 2.40Up
Virgin spermatheca1520 ± 624 of 4 1.26Up
Mated spermatheca1416 ± 1194 of 4 1.17None
Adult carcass2198 ± 774 of 4 1.80Up
Larval CNS750 ± 774 of 4 0.62Down
Larval Salivary gland2809 ± 804 of 4 2.33Up
Larval midgut2120 ± 694 of 4 1.76Up
Larval tubule4700 ± 684 of 4 3.90Up
Larval hindgut2212 ± 384 of 4 1.83Up
Larval fat body5619 ± 6374 of 4 4.70Up
Larval trachea2578 ± 2504 of 4 2.14Up
Larval carcass1493 ± 1504 of 4 1.24None
S2 cells (growing)3647 ± 564 of 4 3.02Up
Whole fly1207 ± 744 of 4

Looking for FBgn0034398. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime