FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034420 through 18771 annotations produced 2 hits

Gene 1 (CG10737):

Annotation Number : CG10737
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034420
Gbrowse : chr2R:15051651-15065728 (+) // 100.0 //
Probeset : 1631308_at
Accessions : protein= NP_001014538; /// NP_001137710; /// NP_001137711; /// NP_001137712; /// NP_001137713; /// NP_001137714; /// NP_001137715; /// NP_001137716; /// NP_001137717; /// NP_611398; /// NP_725861; /// NP_725862;, nucleotide= NM_001014538; /// NM_001144238; /// NM_001144239; /// NM_001144240; /// NM_001144241; /// NM_001144242; /// NM_001144243; /// NM_001144244; /// NM_001144245; /// NM_137554; /// NM_166333; /// NM_166334;
Interpro : 0019992 // diacylglycerol binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding //
FlyMine data for FBgn0034420.
BDGP gene expression has embryonic in situ data for CG10737: 9 pix of staining in 6 body parts.
VDRC has 3 RNAi stocks for FBgn0034420 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	385 ± 14	4 of 4	1.40	Up
Head	464 ± 14	4 of 4	1.70	Up
Eye	409 ± 17	4 of 4	1.46	Up
Thoracicoabdominal ganglion	440 ± 15	4 of 4	1.60	Up
Salivary gland	45 ± 6	3 of 4	0.16	Down
Crop	2734 ± 87	4 of 4	9.80	Up
Midgut	221 ± 5	4 of 4	0.80	Down
Tubule	62 ± 1	4 of 4	0.20	Down
Hindgut	1101 ± 17	4 of 4	3.90	Up
Heart	559 ± 4	4 of 4	2.00	Up
Fat body	325 ± 22	4 of 4	1.16	None
Ovary	158 ± 5	4 of 4	0.60	Down
Testis	49 ± 2	4 of 4	0.20	Down
Male accessory glands	959 ± 34	4 of 4	3.40	Up
Virgin spermatheca	148 ± 12	4 of 4	0.53	Down
Mated spermatheca	272 ± 16	4 of 4	0.97	None
Adult carcass	644 ± 13	4 of 4	2.30	Up
Larval CNS	196 ± 11	4 of 4	0.70	Down
Larval Salivary gland	93 ± 5	4 of 4	0.33	Down
Larval midgut	209 ± 11	4 of 4	0.75	Down
Larval tubule	148 ± 5	4 of 4	0.50	Down
Larval hindgut	671 ± 11	4 of 4	2.40	Up
Larval fat body	67 ± 5	4 of 4	0.20	Down
Larval trachea	519 ± 77	4 of 4	1.85	Up
Larval carcass	798 ± 28	4 of 4	2.85	Up
S2 cells (growing)	319 ± 11	4 of 4	1.14	None
Whole fly	280 ± 16	4 of 4

Gene 1 (CG10737):

Annotation Number : CG10737
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034420
Gbrowse : chr2R:15051651-15064589 (+) // 100.0 //
Probeset : 1629898_s_at
Accessions : protein= NP_001014538; /// NP_001137710; /// NP_001137711; /// NP_001137712; /// NP_001137713; /// NP_001137714; /// NP_001137715; /// NP_001137716; /// NP_001137717; /// NP_611398; /// NP_725861; /// NP_725862;, nucleotide= NM_001014538; /// NM_001144238; /// NM_001144239; /// NM_001144240; /// NM_001144241; /// NM_001144242; /// NM_001144243; /// NM_001144244; /// NM_001144245; /// NM_137554; /// NM_166333; /// NM_166334;
Interpro : 0019992 // diacylglycerol binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding //
FlyMine data for FBgn0034420.
BDGP gene expression has embryonic in situ data for CG10737: 9 pix of staining in 6 body parts.
VDRC has 3 RNAi stocks for FBgn0034420 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	142 ± 4	4 of 4	0.80	Down
Head	251 ± 16	4 of 4	1.40	Up
Eye	106 ± 4	4 of 4	0.59	Down
Thoracicoabdominal ganglion	138 ± 8	4 of 4	0.80	Down
Salivary gland	42 ± 7	1 of 4	0.24	Down
Crop	1676 ± 37	4 of 4	9.20	Up
Midgut	83 ± 6	4 of 4	0.50	Down
Tubule	31 ± 1	0 of 4	0.20	Down
Hindgut	550 ± 9	4 of 4	3.00	Up
Heart	335 ± 8	4 of 4	1.84	Up
Fat body	99 ± 9	4 of 4	0.55	Down
Ovary	51 ± 1	4 of 4	0.30	Down
Testis	21 ± 0	4 of 4	0.10	Down
Male accessory glands	492 ± 27	4 of 4	2.70	Up
Virgin spermatheca	41 ± 4	4 of 4	0.22	Down
Mated spermatheca	72 ± 5	4 of 4	0.40	Down
Adult carcass	595 ± 32	4 of 4	3.30	Up
Larval CNS	63 ± 5	4 of 4	0.35	Down
Larval Salivary gland	45 ± 2	2 of 4	0.25	Down
Larval midgut	134 ± 3	4 of 4	0.74	Down
Larval tubule	60 ± 3	0 of 4	0.30	Down
Larval hindgut	426 ± 14	4 of 4	2.34	Up
Larval fat body	21 ± 2	2 of 4	0.10	Down
Larval trachea	113 ± 12	4 of 4	0.62	Down
Larval carcass	855 ± 17	4 of 4	4.69	Up
S2 cells (growing)	256 ± 7	4 of 4	1.40	Up
Whole fly	182 ± 9	4 of 4

Looking for FBgn0034420. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720