Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0034429 through 18771 annotations produced 1 hits


Annotation Number : CG18607
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034429
Gbrowse : chr2R:15176630-15177305 (+) // 100.0 //
Probeset : 1623840_at
Accessions : protein= NP_611406;, nucleotide= NM_137562;
Interpro : 0008080 // N-acetyltransferase activity // inferred from electronic annotation
FlyMine data for FBgn0034429.
VDRC has 3 RNAi stocks for FBgn0034429 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 10 of 4 0.30None
Head3 10 of 4 0.50None
Eye1 00 of 4 0.17None
Thoracicoabdominal ganglion1 00 of 4 0.20None
Salivary gland4 20 of 4 0.60None
Crop3 10 of 4 0.50None
Midgut41 34 of 4 6.10Up
Tubule4 20 of 4 0.60None
Hindgut24 24 of 4 3.50Up
Heart2 00 of 4 0.32None
Fat body4 20 of 4 0.63None
Ovary3 00 of 4 0.50None
Testis5 10 of 4 0.70None
Male accessory glands2 00 of 4 0.30None
Virgin spermatheca3 00 of 4 0.54None
Mated spermatheca4 10 of 4 0.60None
Adult carcass8 20 of 4 1.30None
Larval CNS2 10 of 4 0.32None
Larval Salivary gland5 20 of 4 0.86None
Larval midgut1338 1684 of 4196.10Up
Larval tubule127 114 of 418.70Up
Larval hindgut353 984 of 451.75Up
Larval fat body4 20 of 4 0.70None
Larval trachea2 20 of 4 0.34None
Larval carcass3 00 of 4 0.47None
S2 cells (growing)2 00 of 4 0.30None
Whole fly6 21 of 4

Looking for FBgn0034429. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime