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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034430 through 18771 annotations produced 1 hits



Myb-interacting protein 40 (mip40):

Annotation Number : CG15119
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034430
Gbrowse : chr2R:15178608-15179708 (-) // 100.0 //
Probeset : 1638339_at
Accessions : protein= NP_611407;, nucleotide= NM_137563;
Pathway : 0031523 // Myb complex // inferred from direct assay
FlyMine data for FBgn0034430.
BioGrid reports that CG15119 interacts with CG8784 CG4821 .
TRiP has 1 RNAi stocks for FBgn0034430 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain117 44 of 4 0.60Down
Head88 34 of 4 0.40Down
Eye87 44 of 4 0.43Down
Thoracicoabdominal ganglion93 04 of 4 0.50Down
Salivary gland160 114 of 4 0.78Down
Crop106 44 of 4 0.50Down
Midgut60 14 of 4 0.30Down
Tubule50 04 of 4 0.20Down
Hindgut69 14 of 4 0.30Down
Heart83 44 of 4 0.40Down
Fat body135 134 of 4 0.66Down
Ovary330 94 of 4 1.60Up
Testis384 154 of 4 1.90Up
Male accessory glands167 114 of 4 0.80Down
Virgin spermatheca87 14 of 4 0.43Down
Mated spermatheca85 14 of 4 0.42Down
Adult carcass103 134 of 4 0.50Down
Larval CNS283 184 of 4 1.38Up
Larval Salivary gland90 34 of 4 0.44Down
Larval midgut51 44 of 4 0.25Down
Larval tubule67 34 of 4 0.30Down
Larval hindgut73 54 of 4 0.36Down
Larval fat body170 124 of 4 0.80None
Larval trachea181 54 of 4 0.88None
Larval carcass86 54 of 4 0.42Down
S2 cells (growing)212 74 of 4 1.03None
Whole fly205 84 of 4

Looking for FBgn0034430. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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