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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034437 through 18771 annotations produced 1 hits



(CG10051):

Annotation Number : CG10051
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034437
Gbrowse : chr2R:15251149-15254799 (+) // 100.0 //
Probeset : 1625957_at
Accessions : protein= NP_611414;, nucleotide= NM_137570;
Interpro : 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from
FlyMine data for FBgn0034437.
BioGrid reports that CG10051 interacts with CG2767 CG4461 .
VDRC has 1 RNAi stocks for FBgn0034437 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.20Down
Head2 ± 10 of 4 0.20Down
Eye4 ± 10 of 4 0.28Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland10 ± 30 of 4 0.61None
Crop2 ± 10 of 4 0.20Down
Midgut95 ± 114 of 4 5.90Up
Tubule2 ± 00 of 4 0.20Down
Hindgut2 ± 00 of 4 0.10Down
Heart8 ± 22 of 4 0.53Down
Fat body45 ± 213 of 4 2.75None
Ovary0 ± 00 of 4 0.00Down
Testis1 ± 00 of 4 0.10Down
Male accessory glands3 ± 10 of 4 0.20Down
Virgin spermatheca1 ± 00 of 4 0.11Down
Mated spermatheca26 ± 74 of 4 1.64None
Adult carcass2 ± 10 of 4 0.20Down
Larval CNS1 ± 00 of 4 0.08Down
Larval Salivary gland1 ± 00 of 4 0.10Down
Larval midgut1308 ± 604 of 479.90Up
Larval tubule0 ± 00 of 4 0.10Down
Larval hindgut4 ± 10 of 4 0.28Down
Larval fat body2 ± 10 of 4 0.10Down
Larval trachea0 ± 00 of 4 0.03Down
Larval carcass3 ± 00 of 4 0.20Down
S2 cells (growing)0 ± 00 of 4 0.04Down
Whole fly16 ± 14 of 4

Looking for FBgn0034437. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime