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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034447 through 18771 annotations produced 1 hits



/// (CG7744 /// DmirCG7744):

Annotation Number : CG7744
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034447
Gbrowse : chr2R:15340013-15343039 (+) // 100.0 //
Probeset : 1638510_at
Accessions : protein= NP_611422;, nucleotide= NM_137578;
FlyMine data for FBgn0034447.
BioGrid reports that CG7744 interacts with CG8498 CG9032 .
VDRC has 2 RNAi stocks for FBgn0034447 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain24 ± 14 of 4 0.10Down
Head20 ± 13 of 4 0.10Down
Eye12 ± 00 of 4 0.07Down
Thoracicoabdominal ganglion25 ± 13 of 4 0.10Down
Salivary gland38 ± 72 of 4 0.20Down
Crop33 ± 14 of 4 0.20Down
Midgut43 ± 44 of 4 0.20Down
Tubule36 ± 52 of 4 0.20Down
Hindgut23 ± 22 of 4 0.10Down
Heart22 ± 21 of 4 0.11Down
Fat body61 ± 82 of 4 0.31Down
Ovary492 ± 44 of 4 2.50Up
Testis29 ± 14 of 4 0.10Down
Male accessory glands47 ± 34 of 4 0.20Down
Virgin spermatheca25 ± 20 of 4 0.13Down
Mated spermatheca31 ± 30 of 4 0.16Down
Adult carcass49 ± 14 of 4 0.20Down
Larval CNS123 ± 94 of 4 0.62Down
Larval Salivary gland100 ± 84 of 4 0.51Down
Larval midgut70 ± 14 of 4 0.36Down
Larval tubule49 ± 44 of 4 0.30Down
Larval hindgut50 ± 54 of 4 0.26Down
Larval fat body39 ± 24 of 4 0.20Down
Larval trachea69 ± 134 of 4 0.35Down
Larval carcass91 ± 204 of 4 0.46Down
S2 cells (growing)233 ± 54 of 4 1.18Up
Whole fly198 ± 94 of 4

Looking for FBgn0034447. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime