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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034460 through 18771 annotations produced 1 hits



(CG18367):

Annotation Number : CG18367
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034460
Gbrowse : chr2R:15524164-15524803 (+) // 100.0 //
Probeset : 1634399_at
Accessions : protein= NP_663311;, nucleotide= NM_145338;
FlyMine data for FBgn0034460.
BioGrid reports that CG18367 interacts with CG18367 CG30183 .
VDRC has 3 RNAi stocks for FBgn0034460 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain33 ± 24 of 4 1.90Up
Head19 ± 13 of 4 1.10None
Eye1 ± 00 of 4 0.08Down
Thoracicoabdominal ganglion49 ± 34 of 4 2.80Up
Salivary gland9 ± 21 of 4 0.52None
Crop3 ± 10 of 4 0.20Down
Midgut33 ± 14 of 4 1.90Up
Tubule2 ± 00 of 4 0.20Down
Hindgut11 ± 11 of 4 0.60None
Heart4 ± 31 of 4 0.24Down
Fat body2 ± 20 of 4 0.16Down
Ovary2 ± 10 of 4 0.20Down
Testis2 ± 10 of 4 0.20Down
Male accessory glands6 ± 10 of 4 0.40Down
Virgin spermatheca3 ± 00 of 4 0.20Down
Mated spermatheca6 ± 00 of 4 0.38Down
Adult carcass32 ± 44 of 4 1.80Up
Larval CNS1 ± 10 of 4 0.08Down
Larval Salivary gland4 ± 10 of 4 0.26Down
Larval midgut2 ± 10 of 4 0.15Down
Larval tubule2 ± 00 of 4 0.10Down
Larval hindgut2 ± 00 of 4 0.14Down
Larval fat body5 ± 10 of 4 0.30Down
Larval trachea0 ± 00 of 4 0.06Down
Larval carcass8 ± 20 of 4 0.50None
S2 cells (growing)1 ± 00 of 4 0.09Down
Whole fly17 ± 24 of 4

Looking for FBgn0034460. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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