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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034462 through 18771 annotations produced 1 hits



(CG15905):

Annotation Number : CG15905
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034462
Gbrowse : chr2R:15534256-15535073 (-) // 100.0 //
Probeset : 1623980_at
Accessions : protein= NP_611436;, nucleotide= NM_137592;
FlyMine data for FBgn0034462.
VDRC has 2 RNAi stocks for FBgn0034462 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.70None
Head2 ± 00 of 4 1.00None
Eye0 ± 00 of 4 0.19None
Thoracicoabdominal ganglion1 ± 00 of 4 0.40None
Salivary gland13 ± 20 of 4 4.91Up
Crop4 ± 20 of 4 1.70None
Midgut4 ± 00 of 4 1.50None
Tubule2 ± 00 of 4 0.80None
Hindgut7 ± 00 of 4 2.60Up
Heart1 ± 00 of 4 0.57None
Fat body4 ± 30 of 4 1.43None
Ovary2 ± 10 of 4 1.00None
Testis1 ± 00 of 4 0.70None
Male accessory glands1 ± 00 of 4 0.60None
Virgin spermatheca1 ± 00 of 4 0.58None
Mated spermatheca3 ± 00 of 4 1.04None
Adult carcass8 ± 30 of 4 3.10None
Larval CNS0 ± 00 of 4 0.35None
Larval Salivary gland1 ± 00 of 4 0.37None
Larval midgut1 ± 00 of 4 0.65None
Larval tubule1 ± 00 of 4 0.60None
Larval hindgut7 ± 21 of 4 2.51None
Larval fat body1 ± 00 of 4 0.40None
Larval trachea1 ± 00 of 4 0.45None
Larval carcass18 ± 42 of 4 6.41Up
S2 cells (growing)1 ± 00 of 4 0.63None
Whole fly2 ± 10 of 4

Looking for FBgn0034462. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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