Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: 16/4/2014: We have just migrated to a new server (the old one ran XP!).
Latest news: Please report unexpected behaviours to julian.dow @ glasgow. ac. uk
Latest news: Our alternative view (http://flyatlas.gla.ac.uk/flyatlas/index.html) is still available.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034527 through 18771 annotations produced 2 hits



(CG9945):

Annotation Number : CG9945
Flybase ID : FBgn0034527
Gbrowse : chr2R:16506007-16508573 (+) // 100.0 //
Probeset : 1631690_a_at
Accessions : protein= NP_611494; /// NP_725981;, nucleotide= NM_137650; /// NM_166403;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay
FlyMine data for FBgn0034527.
BDGP gene expression has embryonic in situ data for CG9945: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0034527 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain99 14 of 4 1.30Up
Head53 24 of 4 0.70Down
Eye63 34 of 4 0.80Down
Thoracicoabdominal ganglion76 54 of 4 1.00None
Salivary gland88 74 of 4 1.12None
Crop72 44 of 4 0.90None
Midgut63 24 of 4 0.80Down
Tubule55 44 of 4 0.70Down
Hindgut50 34 of 4 0.60Down
Heart52 24 of 4 0.66Down
Fat body44 64 of 4 0.56Down
Ovary180 44 of 4 2.30Up
Testis104 54 of 4 1.30Up
Male accessory glands64 54 of 4 0.80None
Virgin spermatheca66 24 of 4 0.83Down
Mated spermatheca69 24 of 4 0.88None
Adult carcass56 14 of 4 0.70Down
Larval CNS86 14 of 4 1.10None
Larval Salivary gland58 34 of 4 0.74Down
Larval midgut70 44 of 4 0.88None
Larval tubule109 34 of 4 1.40Up
Larval hindgut53 34 of 4 0.68Down
Larval fat body68 94 of 4 0.90None
Larval trachea47 74 of 4 0.59Down
Larval carcass29 24 of 4 0.37Down
S2 cells (growing)79 34 of 4 1.00None
Whole fly79 44 of 4



(CG9945):

Annotation Number : CG9945
Flybase ID : FBgn0034527
Gbrowse : chr2R:16506007-16508586 (+) // 100.0 //
Probeset : 1630411_at
Accessions : protein= NP_611494; /// NP_725981;, nucleotide= NM_137650; /// NM_166403;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay
FlyMine data for FBgn0034527.
BDGP gene expression has embryonic in situ data for CG9945: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0034527 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain52 24 of 4 1.10None
Head37 54 of 4 0.80None
Eye19 14 of 4 0.44Down
Thoracicoabdominal ganglion44 14 of 4 1.00None
Salivary gland42 64 of 4 0.94None
Crop43 34 of 4 0.90None
Midgut34 14 of 4 0.80None
Tubule46 14 of 4 1.00None
Hindgut37 24 of 4 0.80None
Heart27 84 of 4 0.61None
Fat body75 94 of 4 1.65Up
Ovary173 94 of 4 3.80Up
Testis22 14 of 4 0.50None
Male accessory glands36 14 of 4 0.80None
Virgin spermatheca59 124 of 4 1.31None
Mated spermatheca59 34 of 4 1.30None
Adult carcass35 24 of 4 0.80None
Larval CNS118 364 of 4 2.60Up
Larval Salivary gland43 64 of 4 0.95None
Larval midgut51 54 of 4 1.14None
Larval tubule63 24 of 4 1.40None
Larval hindgut70 74 of 4 1.54None
Larval fat body33 24 of 4 0.70None
Larval trachea18 24 of 4 0.41Down
Larval carcass45 14 of 4 0.99None
S2 cells (growing)57 54 of 4 1.26None
Whole fly45 74 of 4

Looking for FBgn0034527. 2 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime