Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034528 through 18771 annotations produced 1 hits



(CG11180):

Annotation Number : CG11180
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034528
Gbrowse : chr2R:16508418-16510808 (-) // 100.0 //
Probeset : 1640808_at
Accessions : protein= NP_611495;, nucleotide= NM_137651;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation
FlyMine data for FBgn0034528.
BioGrid reports that CG11180 interacts with CG3548 CG11228 CG14302 CG31122 CG8884 .
TRiP has 1 RNAi stocks for FBgn0034528 available for purchase.
VDRC has 3 RNAi stocks for FBgn0034528 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain30 ± 04 of 4 0.30Down
Head50 ± 34 of 4 0.50Down
Eye38 ± 24 of 4 0.37Down
Thoracicoabdominal ganglion37 ± 14 of 4 0.40Down
Salivary gland61 ± 64 of 4 0.59Down
Crop89 ± 14 of 4 0.90None
Midgut55 ± 24 of 4 0.50Down
Tubule47 ± 44 of 4 0.50Down
Hindgut56 ± 24 of 4 0.50Down
Heart73 ± 34 of 4 0.70Down
Fat body109 ± 104 of 4 1.05None
Ovary316 ± 24 of 4 3.00Up
Testis20 ± 14 of 4 0.20Down
Male accessory glands98 ± 44 of 4 0.90None
Virgin spermatheca77 ± 34 of 4 0.74Down
Mated spermatheca95 ± 64 of 4 0.91None
Adult carcass56 ± 24 of 4 0.50Down
Larval CNS159 ± 64 of 4 1.53Up
Larval Salivary gland81 ± 64 of 4 0.78None
Larval midgut52 ± 54 of 4 0.50Down
Larval tubule26 ± 24 of 4 0.20Down
Larval hindgut95 ± 134 of 4 0.91None
Larval fat body23 ± 24 of 4 0.20Down
Larval trachea138 ± 174 of 4 1.33Up
Larval carcass112 ± 324 of 4 1.08None
S2 cells (growing)87 ± 24 of 4 0.84None
Whole fly104 ± 64 of 4

Looking for FBgn0034528. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime