FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034534 through 18771 annotations produced 1 hits

maf-S (maf-S):

Annotation Number : CG9954
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034534
Gbrowse : chr2R:16528475-16529179 (+) // 100.0 //
Probeset : 1635314_at
Accessions : protein= NP_611500;, nucleotide= NM_137656;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // no
Interpro : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // non-traceable author sta
FlyMine data for FBgn0034534.
Homophila reports that CG9954 is a close match (6e-11) to human gene D14S46E;NRL;RP27 (NP_006168), a gene associated with Retinal degeneration, autosomal recessive, clumped pigment type (3);Retinitis pigmentosa-27 (3).
TRiP has 2 RNAi stocks for FBgn0034534 available for purchase.
VDRC has 3 RNAi stocks for FBgn0034534 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	936 ± 15	4 of 4	1.80	Up
Head	998 ± 46	4 of 4	2.00	Up
Eye	1516 ± 32	4 of 4	2.99	Up
Thoracicoabdominal ganglion	928 ± 29	4 of 4	1.80	Up
Salivary gland	1222 ± 33	4 of 4	2.41	Up
Crop	1001 ± 12	4 of 4	2.00	Up
Midgut	913 ± 28	4 of 4	1.80	Up
Tubule	677 ± 35	4 of 4	1.30	Up
Hindgut	982 ± 22	4 of 4	1.90	Up
Heart	564 ± 45	4 of 4	1.11	None
Fat body	500 ± 27	4 of 4	0.99	None
Ovary	528 ± 11	4 of 4	1.00	None
Testis	540 ± 25	4 of 4	1.10	None
Male accessory glands	1884 ± 39	4 of 4	3.70	Up
Virgin spermatheca	1001 ± 38	4 of 4	1.98	Up
Mated spermatheca	1031 ± 52	4 of 4	2.03	Up
Adult carcass	654 ± 39	4 of 4	1.30	Up
Larval CNS	569 ± 37	4 of 4	1.12	Up
Larval Salivary gland	564 ± 12	4 of 4	1.11	Up
Larval midgut	614 ± 52	4 of 4	1.21	None
Larval tubule	666 ± 11	4 of 4	1.30	Up
Larval hindgut	432 ± 13	4 of 4	0.85	Down
Larval fat body	719 ± 43	4 of 4	1.40	Up
Larval trachea	571 ± 92	4 of 4	1.13	None
Larval carcass	313 ± 31	4 of 4	0.62	Down
S2 cells (growing)	484 ± 15	4 of 4	0.96	None
Whole fly	507 ± 9	4 of 4

Looking for FBgn0034534. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720