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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034537 through 18771 annotations produced 1 hits



DMAP1 (DMAP1):

Annotation Number : CG11132
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034537
Gbrowse : chr2R:16531542-16533376 (+) // 100.0 //
Probeset : 1638500_at
Accessions : protein= NP_611503;, nucleotide= NM_137659;
Pathway : engulfment // inferred from mutant phenotype /// 0016481 // negative regulation of transcription // inferred from elect
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // infer
FlyMine data for FBgn0034537.
BDGP gene expression has embryonic in situ data for CG11132: 4 pix of staining in 1 body parts.
BioGrid reports that CG11132 interacts with CG13605 CG9207 CG1968 .
VDRC has 1 RNAi stocks for FBgn0034537 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain191 ± 44 of 4 1.20Up
Head100 ± 14 of 4 0.60Down
Eye61 ± 14 of 4 0.40Down
Thoracicoabdominal ganglion133 ± 44 of 4 0.90Down
Salivary gland164 ± 114 of 4 1.06None
Crop134 ± 34 of 4 0.90Down
Midgut101 ± 34 of 4 0.70Down
Tubule112 ± 54 of 4 0.70Down
Hindgut142 ± 134 of 4 0.90None
Heart57 ± 54 of 4 0.37Down
Fat body69 ± 164 of 4 0.45Down
Ovary283 ± 84 of 4 1.80Up
Testis47 ± 14 of 4 0.30Down
Male accessory glands163 ± 84 of 4 1.10None
Virgin spermatheca57 ± 54 of 4 0.37Down
Mated spermatheca67 ± 34 of 4 0.43Down
Adult carcass80 ± 44 of 4 0.50Down
Larval CNS305 ± 254 of 4 1.97Up
Larval Salivary gland144 ± 54 of 4 0.93None
Larval midgut89 ± 44 of 4 0.58Down
Larval tubule112 ± 54 of 4 0.70Down
Larval hindgut106 ± 44 of 4 0.69Down
Larval fat body65 ± 44 of 4 0.40Down
Larval trachea102 ± 104 of 4 0.66Down
Larval carcass144 ± 54 of 4 0.93None
S2 cells (growing)233 ± 24 of 4 1.50Up
Whole fly155 ± 44 of 4

Looking for FBgn0034537. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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