Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034538 through 18771 annotations produced 1 hits



/// /// GA14157 (CG16799 /// DmirCG16799 /// DpseGA14157):

Annotation Number : CG16799
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034538
Gbrowse : chr2R:16540719-16542596 (-) // 100.0 //
Probeset : 1634207_at
Accessions : protein= NP_611504;, nucleotide= NM_137660;
Interpro : "0003796 // lysozyme activity // non-traceable author statement /// 0003796 // lysozyme activity // inferred from electr
FlyMine data for FBgn0034538.
Homophila reports that CG16799 is a close match (2e-16) to human gene LYZ (NP_000230), a gene associated with Amyloidosis, renal, 105200 (3).
VDRC has 3 RNAi stocks for FBgn0034538 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain28 ± 04 of 4 0.10Down
Head282 ± 154 of 4 1.00None
Eye159 ± 314 of 4 0.58Down
Thoracicoabdominal ganglion37 ± 54 of 4 0.10Down
Salivary gland749 ± 284 of 4 2.70Up
Crop92 ± 34 of 4 0.30Down
Midgut227 ± 94 of 4 0.80None
Tubule680 ± 1394 of 4 2.40Up
Hindgut129 ± 74 of 4 0.50Down
Heart2176 ± 824 of 4 7.83Up
Fat body2444 ± 3394 of 4 8.80Up
Ovary4 ± 00 of 4 0.00Down
Testis22 ± 23 of 4 0.10Down
Male accessory glands1314 ± 684 of 4 4.70Up
Virgin spermatheca1461 ± 2014 of 4 5.26Up
Mated spermatheca1281 ± 794 of 4 4.61Up
Adult carcass1385 ± 1284 of 4 5.00Up
Larval CNS8 ± 20 of 4 0.03Down
Larval Salivary gland289 ± 214 of 4 1.04None
Larval midgut1577 ± 444 of 4 5.68Up
Larval tubule983 ± 114 of 4 3.50Up
Larval hindgut261 ± 214 of 4 0.94None
Larval fat body1938 ± 2944 of 4 7.00Up
Larval trachea358 ± 684 of 4 1.29None
Larval carcass125 ± 164 of 4 0.45Down
S2 cells (growing)8 ± 01 of 4 0.03Down
Whole fly277 ± 324 of 4

Looking for FBgn0034538. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime