Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034541 through 18771 annotations produced 1 hits



/// /// /// GA12287 (CG13437 /// DafsCG13437 /// DmirCG13437 /// DpseGA12287):

Annotation Number : CG13437
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034541
Gbrowse : chr2R:16549253-16549932 (+) // 100.0 //
Probeset : 1636012_at
Accessions : protein= NP_611507;, nucleotide= NM_137663;
FlyMine data for FBgn0034541.
VDRC has 2 RNAi stocks for FBgn0034541 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 00 of 4 0.50None
Head13 ± 24 of 4 1.80None
Eye7 ± 12 of 4 0.97None
Thoracicoabdominal ganglion6 ± 00 of 4 0.80None
Salivary gland16 ± 30 of 4 2.18None
Crop8 ± 21 of 4 1.10None
Midgut7 ± 21 of 4 1.10None
Tubule5 ± 00 of 4 0.70Down
Hindgut8 ± 02 of 4 1.20None
Heart4 ± 10 of 4 0.58None
Fat body7 ± 12 of 4 0.95None
Ovary3 ± 10 of 4 0.50None
Testis3 ± 00 of 4 0.50Down
Male accessory glands15 ± 42 of 4 2.20None
Virgin spermatheca5 ± 11 of 4 0.70None
Mated spermatheca5 ± 21 of 4 0.81None
Adult carcass9 ± 20 of 4 1.20None
Larval CNS3 ± 01 of 4 0.51None
Larval Salivary gland3 ± 10 of 4 0.53None
Larval midgut7 ± 00 of 4 1.00None
Larval tubule6 ± 11 of 4 0.90None
Larval hindgut7 ± 13 of 4 0.98None
Larval fat body7 ± 10 of 4 1.10None
Larval trachea8 ± 33 of 4 1.09None
Larval carcass4 ± 00 of 4 0.58None
S2 cells (growing)3 ± 10 of 4 0.53None
Whole fly7 ± 10 of 4

Looking for FBgn0034541. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime