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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034551 through 18771 annotations produced 1 hits



(CG15225):

Annotation Number : CG15225
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034551
Gbrowse : chr2R:16680471-16681191 (+) // 100.0 //
Probeset : 1638072_at
Accessions : protein= NP_611516;, nucleotide= NM_137672;
FlyMine data for FBgn0034551.
VDRC has 2 RNAi stocks for FBgn0034551 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 2.30None
Head1 00 of 4 1.90None
Eye1 00 of 4 2.24None
Thoracicoabdominal ganglion2 10 of 4 3.20None
Salivary gland1 00 of 4 2.59None
Crop1 00 of 4 1.70None
Midgut0 00 of 4 1.10None
Tubule1 00 of 4 2.40None
Hindgut0 00 of 4 1.00None
Heart1 00 of 4 1.93None
Fat body1 00 of 4 1.90None
Ovary0 00 of 4 0.90None
Testis0 00 of 4 1.20None
Male accessory glands1 00 of 4 1.80None
Virgin spermatheca1 10 of 4 2.66None
Mated spermatheca2 10 of 4 3.62None
Adult carcass3 10 of 4 4.10None
Larval CNS0 00 of 4 0.83None
Larval Salivary gland0 00 of 4 1.03None
Larval midgut0 00 of 4 0.93None
Larval tubule1 00 of 4 2.30None
Larval hindgut0 00 of 4 1.17None
Larval fat body5 30 of 4 7.00None
Larval trachea4 30 of 4 5.59None
Larval carcass5 20 of 4 6.97None
S2 cells (growing)1 00 of 4 1.38None
Whole fly0 00 of 4

Looking for FBgn0034551. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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