FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034577 through 18771 annotations produced 1 hits

capping protein alpha (cpa):

Annotation Number : CG10540
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034577
Gbrowse : chr2R:16945295-16947388 (+) // 100.0 //
Probeset : 1625110_at
Accessions : protein= NP_611539;, nucleotide= NM_137695;
Pathway : engulfment // inferred from mutant phenotype /// 0007015 // actin filament organization // inferred from mutant phenoty
Interpro : 0005869 // dynactin complex // inferred from sequence or structural similarity /// 0005875 // microtubule associated com
FlyMine data for FBgn0034577.
BDGP gene expression has embryonic in situ data for CG10540: 4 pix of staining in 1 body parts.
BioGrid reports that CG10540 interacts with CG17158 CG4335 CG9014 CG14410 CG14506 CG15710 CG5315 .
TRiP has 2 RNAi stocks for FBgn0034577 available for purchase.
VDRC has 2 RNAi stocks for FBgn0034577 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	240 ± 4	4 of 4	0.50	Down
Head	263 ± 10	4 of 4	0.60	Down
Eye	302 ± 11	4 of 4	0.68	Down
Thoracicoabdominal ganglion	307 ± 5	4 of 4	0.70	Down
Salivary gland	664 ± 20	4 of 4	1.49	Up
Crop	687 ± 19	4 of 4	1.50	Up
Midgut	1015 ± 50	4 of 4	2.30	Up
Tubule	672 ± 21	4 of 4	1.50	Up
Hindgut	514 ± 11	4 of 4	1.20	None
Heart	381 ± 27	4 of 4	0.86	None
Fat body	287 ± 27	4 of 4	0.65	Down
Ovary	669 ± 14	4 of 4	1.50	Up
Testis	146 ± 3	4 of 4	0.30	Down
Male accessory glands	799 ± 16	4 of 4	1.80	Up
Virgin spermatheca	709 ± 21	4 of 4	1.59	Up
Mated spermatheca	781 ± 41	4 of 4	1.76	Up
Adult carcass	242 ± 13	4 of 4	0.50	Down
Larval CNS	650 ± 22	4 of 4	1.46	Up
Larval Salivary gland	1008 ± 25	4 of 4	2.27	Up
Larval midgut	1190 ± 30	4 of 4	2.68	Up
Larval tubule	1127 ± 26	4 of 4	2.50	Up
Larval hindgut	920 ± 38	4 of 4	2.07	Up
Larval fat body	537 ± 39	4 of 4	1.20	None
Larval trachea	895 ± 62	4 of 4	2.01	Up
Larval carcass	894 ± 20	4 of 4	2.01	Up
S2 cells (growing)	1363 ± 15	4 of 4	3.07	Up
Whole fly	444 ± 24	4 of 4

Looking for FBgn0034577. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720