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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034582 through 18771 annotations produced 1 hits



CG10531 (Cht9):

Annotation Number : CG10531
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034582
Gbrowse : chr2R:16955496-16956777 (-) // 99.14 //
Probeset : 1631446_at
Accessions : protein= NP_611543;, nucleotide= NM_137699;
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity
FlyMine data for FBgn0034582.
Homophila reports that CG10531 is a close match (6e-62) to human gene ASRT7;CHI3L1;GP39;YKL40 (NP_001267), a gene associated with {Asthma-related traits, susceptibility to, 7}, 611960 (3);{Schizophrenia, susceptiblity to}, 181500 (3).
BioGrid reports that CG10531 interacts with CG12773 CG14968 CG2171 CG2714 CG33113 CG3937 .
VDRC has 3 RNAi stocks for FBgn0034582 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 00 of 4 0.10Down
Head21 ± 72 of 4 0.40Down
Eye6 ± 10 of 4 0.10Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.10Down
Salivary gland163 ± 34 of 4 2.75Up
Crop40 ± 351 of 4 0.70None
Midgut620 ± 734 of 410.50Up
Tubule6 ± 10 of 4 0.10Down
Hindgut39 ± 44 of 4 0.70Down
Heart7 ± 00 of 4 0.12Down
Fat body16 ± 71 of 4 0.28Down
Ovary5 ± 00 of 4 0.10Down
Testis3 ± 00 of 4 0.10Down
Male accessory glands4 ± 10 of 4 0.10Down
Virgin spermatheca12 ± 22 of 4 0.21Down
Mated spermatheca11 ± 31 of 4 0.20Down
Adult carcass3 ± 10 of 4 0.10Down
Larval CNS8 ± 22 of 4 0.14Down
Larval Salivary gland11 ± 30 of 4 0.19Down
Larval midgut1873 ± 1844 of 431.66Up
Larval tubule4 ± 10 of 4 0.10Down
Larval hindgut19 ± 33 of 4 0.33Down
Larval fat body3 ± 20 of 4 0.10Down
Larval trachea13 ± 51 of 4 0.23Down
Larval carcass15 ± 00 of 4 0.26Down
S2 cells (growing)7 ± 20 of 4 0.12Down
Whole fly59 ± 24 of 4

Looking for FBgn0034582. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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