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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034639 through 18771 annotations produced 1 hits



(CG15673):

Annotation Number : CG15673
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034639
Gbrowse : chr2R:17496158-17497712 (-) // 100.0 //
Probeset : 1633872_at
Accessions : protein= NP_611591;, nucleotide= NM_137747;
FlyMine data for FBgn0034639.
VDRC has 1 RNAi stocks for FBgn0034639 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain43 34 of 4 1.40None
Head59 34 of 4 1.90Up
Eye42 24 of 4 1.37Up
Thoracicoabdominal ganglion39 24 of 4 1.20None
Salivary gland266 124 of 4 8.49Up
Crop22 21 of 4 0.70Down
Midgut81 24 of 4 2.60Up
Tubule152 94 of 4 4.80Up
Hindgut262 94 of 4 8.30Up
Heart2 10 of 4 0.07Down
Fat body3 20 of 4 0.10Down
Ovary11 02 of 4 0.40Down
Testis10 12 of 4 0.30Down
Male accessory glands46 63 of 4 1.50None
Virgin spermatheca5 10 of 4 0.17Down
Mated spermatheca11 00 of 4 0.36Down
Adult carcass59 44 of 4 1.90Up
Larval CNS14 24 of 4 0.46Down
Larval Salivary gland48 24 of 4 1.53Up
Larval midgut113 94 of 4 3.60Up
Larval tubule178 114 of 4 5.70Up
Larval hindgut241 194 of 4 7.68Up
Larval fat body5 20 of 4 0.20Down
Larval trachea38 64 of 4 1.22None
Larval carcass53 24 of 4 1.70Up
S2 cells (growing)51 34 of 4 1.65Up
Whole fly31 13 of 4

Looking for FBgn0034639. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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