Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034693 through 18771 annotations produced 1 hits



(CG11073):

Annotation Number : CG11073
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034693
Gbrowse : chr2R:17978988-17987231 (-) // 100.0 //
Probeset : 1623429_at
Accessions : protein= NP_001163245; /// NP_611638;, nucleotide= NM_001169774; /// NM_137794;
FlyMine data for FBgn0034693.
VDRC has 3 RNAi stocks for FBgn0034693 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 ± 12 of 4 0.10Down
Head426 ± 174 of 4 5.30Up
Eye375 ± 54 of 4 4.65Up
Thoracicoabdominal ganglion10 ± 20 of 4 0.10Down
Salivary gland11 ± 50 of 4 0.14Down
Crop201 ± 74 of 4 2.50Up
Midgut9 ± 30 of 4 0.10Down
Tubule3 ± 00 of 4 0.00Down
Hindgut59 ± 14 of 4 0.70None
Heart20 ± 22 of 4 0.25Down
Fat body21 ± 40 of 4 0.27Down
Ovary1 ± 00 of 4 0.00Down
Testis5 ± 10 of 4 0.10Down
Male accessory glands2 ± 00 of 4 0.00Down
Virgin spermatheca14 ± 20 of 4 0.18Down
Mated spermatheca21 ± 41 of 4 0.27Down
Adult carcass580 ± 604 of 4 7.20Up
Larval CNS2 ± 10 of 4 0.03Down
Larval Salivary gland99 ± 34 of 4 1.23None
Larval midgut11 ± 20 of 4 0.14Down
Larval tubule4 ± 20 of 4 0.10Down
Larval hindgut104 ± 104 of 4 1.30None
Larval fat body5 ± 10 of 4 0.10Down
Larval trachea174 ± 434 of 4 2.16Up
Larval carcass358 ± 154 of 4 4.44Up
S2 cells (growing)1 ± 00 of 4 0.02Down
Whole fly80 ± 74 of 4

Looking for FBgn0034693. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime