FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034708 through 18771 annotations produced 1 hits

CG5625 (Vps35):

Annotation Number : CG5625
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034708
Gbrowse : chr2R:18073482-18077392 (+) // 100.0 //
Probeset : 1625656_s_at
Accessions : protein= NP_611651; /// NP_726175;, nucleotide= NM_137807; /// NM_166518;
Pathway : 0005768 // endosome // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0034708.
BioGrid reports that CG5625 interacts with CG7879 .
TRiP has 1 RNAi stocks for FBgn0034708 available for purchase.
VDRC has 2 RNAi stocks for FBgn0034708 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	304 ± 4	4 of 4	1.20	Up
Head	288 ± 8	4 of 4	1.10	None
Eye	393 ± 16	4 of 4	1.50	Up
Thoracicoabdominal ganglion	312 ± 4	4 of 4	1.20	Up
Salivary gland	433 ± 12	4 of 4	1.65	Up
Crop	349 ± 3	4 of 4	1.30	Up
Midgut	330 ± 13	4 of 4	1.30	Up
Tubule	430 ± 6	4 of 4	1.60	Up
Hindgut	311 ± 11	4 of 4	1.20	Up
Heart	342 ± 21	4 of 4	1.30	Up
Fat body	272 ± 14	4 of 4	1.04	None
Ovary	362 ± 6	4 of 4	1.40	Up
Testis	97 ± 5	4 of 4	0.40	Down
Male accessory glands	364 ± 14	4 of 4	1.40	Up
Virgin spermatheca	300 ± 11	4 of 4	1.14	Up
Mated spermatheca	331 ± 13	4 of 4	1.26	Up
Adult carcass	236 ± 5	4 of 4	0.90	Down
Larval CNS	444 ± 26	4 of 4	1.69	Up
Larval Salivary gland	492 ± 6	4 of 4	1.88	Up
Larval midgut	276 ± 7	4 of 4	1.05	None
Larval tubule	455 ± 14	4 of 4	1.70	Up
Larval hindgut	382 ± 10	4 of 4	1.46	Up
Larval fat body	288 ± 7	4 of 4	1.10	Up
Larval trachea	342 ± 35	4 of 4	1.30	Up
Larval carcass	305 ± 7	4 of 4	1.17	Up
S2 cells (growing)	466 ± 8	4 of 4	1.77	Up
Whole fly	262 ± 7	4 of 4

Looking for FBgn0034708. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720