FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034728 through 18771 annotations produced 1 hits

rad50 (rad50):

Annotation Number : CG6339
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034728
Gbrowse : chr2R:18308543-18312987 (+) // 100.0 //
Probeset : 1638887_a_at
Accessions : protein= NP_726199;, nucleotide= NM_166533;
Pathway : "0000781 // chromosome
Interpro : telomeric region // inferred from electronic annotation /// 0000793 // condensed chromosome // inferred from direct ass
FlyMine data for FBgn0034728.
VDRC has 2 RNAi stocks for FBgn0034728 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	109 ± 5	4 of 4	0.70	Down
Head	90 ± 7	4 of 4	0.60	Down
Eye	127 ± 2	4 of 4	0.84	None
Thoracicoabdominal ganglion	117 ± 5	4 of 4	0.80	Down
Salivary gland	82 ± 5	4 of 4	0.55	Down
Crop	127 ± 8	4 of 4	0.80	None
Midgut	98 ± 2	4 of 4	0.70	Down
Tubule	158 ± 11	4 of 4	1.00	None
Hindgut	140 ± 4	4 of 4	0.90	None
Heart	91 ± 7	4 of 4	0.61	Down
Fat body	80 ± 10	4 of 4	0.53	Down
Ovary	333 ± 3	4 of 4	2.20	Up
Testis	46 ± 2	4 of 4	0.30	Down
Male accessory glands	212 ± 20	4 of 4	1.40	Up
Virgin spermatheca	173 ± 11	4 of 4	1.15	None
Mated spermatheca	152 ± 6	4 of 4	1.01	None
Adult carcass	82 ± 5	4 of 4	0.50	Down
Larval CNS	233 ± 13	4 of 4	1.55	Up
Larval Salivary gland	62 ± 7	4 of 4	0.42	Down
Larval midgut	46 ± 4	4 of 4	0.31	Down
Larval tubule	92 ± 4	4 of 4	0.60	Down
Larval hindgut	108 ± 13	4 of 4	0.72	Down
Larval fat body	65 ± 4	4 of 4	0.40	Down
Larval trachea	267 ± 54	4 of 4	1.78	Up
Larval carcass	73 ± 5	4 of 4	0.49	Down
S2 cells (growing)	327 ± 12	4 of 4	2.17	Up
Whole fly	150 ± 9	4 of 4

Looking for FBgn0034728. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720