FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034744 through 18771 annotations produced 1 hits

Vps20 (Vps20):

Annotation Number : CG4071
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034744
Gbrowse : chr2R:18496037-18496936 (+) // 100.0 //
Probeset : 1635121_a_at
Accessions : protein= NP_611686; /// NP_726213;, nucleotide= NM_137842; /// NM_166536;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0034744.
BDGP gene expression has embryonic in situ data for CG4071: 4 pix of staining in 1 body parts.
BioGrid reports that CG4071 interacts with CG8038 CG4720 CG5502 CG6398 CG8055 CG8189 CG9277 .
TRiP has 1 RNAi stocks for FBgn0034744 available for purchase.
VDRC has 4 RNAi stocks for FBgn0034744 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	137 ± 3	4 of 4	1.20	None
Head	117 ± 8	4 of 4	1.00	None
Eye	245 ± 16	4 of 4	2.06	Up
Thoracicoabdominal ganglion	131 ± 10	4 of 4	1.10	None
Salivary gland	171 ± 8	4 of 4	1.44	Up
Crop	144 ± 0	4 of 4	1.20	None
Midgut	201 ± 11	4 of 4	1.70	Up
Tubule	232 ± 7	4 of 4	1.90	Up
Hindgut	188 ± 8	4 of 4	1.60	Up
Heart	184 ± 5	4 of 4	1.55	Up
Fat body	112 ± 17	4 of 4	0.94	None
Ovary	155 ± 2	4 of 4	1.30	Up
Testis	67 ± 5	4 of 4	0.60	Down
Male accessory glands	223 ± 12	4 of 4	1.90	Up
Virgin spermatheca	112 ± 5	4 of 4	0.94	None
Mated spermatheca	129 ± 1	4 of 4	1.09	None
Adult carcass	124 ± 8	4 of 4	1.00	None
Larval CNS	119 ± 11	4 of 4	1.00	None
Larval Salivary gland	250 ± 40	4 of 4	2.10	Up
Larval midgut	203 ± 8	4 of 4	1.71	Up
Larval tubule	431 ± 5	4 of 4	3.60	Up
Larval hindgut	166 ± 5	4 of 4	1.40	Up
Larval fat body	198 ± 16	4 of 4	1.70	Up
Larval trachea	151 ± 12	4 of 4	1.27	Up
Larval carcass	127 ± 13	4 of 4	1.07	None
S2 cells (growing)	401 ± 6	4 of 4	3.37	Up
Whole fly	119 ± 10	4 of 4

Looking for FBgn0034744. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720