FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034755 through 18771 annotations produced 1 hits

(CG3746):

Annotation Number : CG3746
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034755
Gbrowse : chr2R:18536620-18537251 (-) // 100.0 //
Probeset : 1638086_at
Accessions : protein= NP_611697;, nucleotide= NM_137853;
FlyMine data for FBgn0034755.
BDGP gene expression has embryonic in situ data for CG3746: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0034755 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	23 ± 1	3 of 4	1.40	None
Head	33 ± 2	4 of 4	2.00	Up
Eye	34 ± 3	4 of 4	2.04	Up
Thoracicoabdominal ganglion	38 ± 2	4 of 4	2.30	Up
Salivary gland	16 ± 5	0 of 4	1.01	None
Crop	159 ± 10	4 of 4	9.50	Up
Midgut	39 ± 3	4 of 4	2.30	Up
Tubule	3 ± 0	0 of 4	0.20	Down
Hindgut	95 ± 2	4 of 4	5.70	Up
Heart	169 ± 10	4 of 4	10.14	Up
Fat body	5 ± 1	0 of 4	0.35	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	3 ± 1	0 of 4	0.20	Down
Male accessory glands	70 ± 1	0 of 4	4.20	Up
Virgin spermatheca	3 ± 1	0 of 4	0.23	Down
Mated spermatheca	6 ± 2	0 of 4	0.38	Down
Adult carcass	32 ± 2	0 of 4	1.90	Up
Larval CNS	29 ± 3	4 of 4	1.75	Up
Larval Salivary gland	122 ± 5	4 of 4	7.36	Up
Larval midgut	12 ± 3	0 of 4	0.75	None
Larval tubule	5 ± 1	0 of 4	0.30	Down
Larval hindgut	144 ± 16	4 of 4	8.65	Up
Larval fat body	1 ± 0	0 of 4	0.10	Down
Larval trachea	226 ± 67	4 of 4	13.55	Up
Larval carcass	117 ± 14	4 of 4	7.06	Up
S2 cells (growing)	0 ± 0	0 of 4	0.04	Down
Whole fly	16 ± 2	2 of 4

Looking for FBgn0034755. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720