FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0034758 through 18771 annotations produced 1 hits

():

Annotation Number : CG13510
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr2R:18545409-18547215 (+) // 100.0 //
Probeset : 1638487_at
Accessions : protein= NP_611702;, nucleotide= NM_137858;
Interpro : 0005515 // protein binding // inferred from physical interaction
BioGrid reports that CG13510 interacts with CG15403 CG32796 CG13760 CG13989 CG14089 CG15293 CG2540 CG2788 CG5501 CG3114 CG31546 CG3186 CG31958 CG33198 CG3469 CG17420 CG4276 CG5171 CG5276 CG6058 CG6199 CG6803 CG7134 CG8023 CG8186 CG9594 CG9610 CG9986 Dmel CR32162 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	1 of 4	0.20	Down
Head	6 ± 1	2 of 4	0.30	Down
Eye	9 ± 1	4 of 4	0.43	Down
Thoracicoabdominal ganglion	6 ± 1	2 of 4	0.30	Down
Salivary gland	91 ± 5	4 of 4	3.96	Up
Crop	19 ± 1	4 of 4	0.80	None
Midgut	195 ± 13	4 of 4	8.50	Up
Tubule	70 ± 13	4 of 4	3.00	Up
Hindgut	30 ± 1	4 of 4	1.30	None
Heart	3 ± 1	1 of 4	0.13	Down
Fat body	6 ± 3	0 of 4	0.26	Down
Ovary	3 ± 1	0 of 4	0.10	Down
Testis	8 ± 1	3 of 4	0.40	Down
Male accessory glands	57 ± 5	4 of 4	2.50	Up
Virgin spermatheca	11 ± 2	0 of 4	0.50	Down
Mated spermatheca	11 ± 1	0 of 4	0.51	Down
Adult carcass	7 ± 1	0 of 4	0.30	Down
Larval CNS	2 ± 1	0 of 4	0.11	Down
Larval Salivary gland	31 ± 4	4 of 4	1.37	None
Larval midgut	301 ± 33	4 of 4	13.07	Up
Larval tubule	113 ± 11	4 of 4	4.90	Up
Larval hindgut	35 ± 7	4 of 4	1.53	None
Larval fat body	9 ± 3	0 of 4	0.40	Down
Larval trachea	5 ± 2	0 of 4	0.22	Down
Larval carcass	11 ± 2	1 of 4	0.50	Down
S2 cells (growing)	4 ± 0	0 of 4	0.21	Down
Whole fly	23 ± 3	4 of 4

Looking for FBgn0034758. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720