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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034768 through 18771 annotations produced 1 hits



Odorant-binding protein 58b (Obp58b):

Annotation Number : CG13518
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034768
Gbrowse : chr2R:18592214-18593073 (+) // 100.0 //
Probeset : 1626959_at
Accessions : protein= NP_611709;, nucleotide= NM_137865;
Interpro : 0005549 // odorant binding // not recorded /// 0005549 // odorant binding // non-traceable author statement /// 0005549
FlyMine data for FBgn0034768.
VDRC has 2 RNAi stocks for FBgn0034768 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 11 of 4 5.60None
Head7 ± 12 of 412.50Up
Eye2 ± 00 of 4 3.76None
Thoracicoabdominal ganglion3 ± 10 of 4 4.90None
Salivary gland2 ± 00 of 4 3.32None
Crop1 ± 10 of 4 2.90None
Midgut2 ± 00 of 4 3.70None
Tubule3 ± 10 of 4 6.30Up
Hindgut1 ± 00 of 4 2.70None
Heart1 ± 00 of 4 1.84None
Fat body1 ± 00 of 4 2.00Up
Ovary1 ± 00 of 4 2.30None
Testis2 ± 00 of 4 3.70None
Male accessory glands21 ± 33 of 434.70Up
Virgin spermatheca2 ± 10 of 4 3.64None
Mated spermatheca2 ± 10 of 4 4.40None
Adult carcass1 ± 00 of 4 2.80Up
Larval CNS3 ± 10 of 4 5.28None
Larval Salivary gland3 ± 20 of 4 4.72None
Larval midgut2 ± 10 of 4 4.32None
Larval tubule3 ± 20 of 4 5.20None
Larval hindgut0 ± 00 of 4 1.00None
Larval fat body1 ± 00 of 4 2.00None
Larval trachea0 ± 00 of 4 1.28None
Larval carcass2 ± 10 of 4 4.20None
S2 cells (growing)1 ± 00 of 4 2.88None
Whole fly0 ± 00 of 4

Looking for FBgn0034768. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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