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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034770 through 18771 annotations produced 1 hits



Odorant-binding protein 58d (Obp58d):

Annotation Number : CG13519
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034770
Gbrowse : chr2R:18594452-18595219 (+) // 100.0 //
Probeset : 1641030_at
Accessions : protein= NP_611711;, nucleotide= NM_137867;
Interpro : 0005549 // odorant binding // not recorded
FlyMine data for FBgn0034770.
VDRC has 3 RNAi stocks for FBgn0034770 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 1.00None
Head1 ± 00 of 4 0.60None
Eye3 ± 10 of 4 1.89None
Thoracicoabdominal ganglion1 ± 00 of 4 0.70None
Salivary gland7 ± 30 of 4 3.96None
Crop4 ± 10 of 4 2.30None
Midgut1 ± 00 of 4 0.80None
Tubule5 ± 00 of 4 2.70Up
Hindgut1 ± 00 of 4 0.80None
Heart2 ± 10 of 4 1.27None
Fat body1 ± 00 of 4 0.77None
Ovary0 ± 00 of 4 0.50None
Testis0 ± 00 of 4 0.50None
Male accessory glands2 ± 00 of 4 1.10None
Virgin spermatheca4 ± 20 of 4 2.17None
Mated spermatheca3 ± 00 of 4 1.96None
Adult carcass5 ± 10 of 4 2.80None
Larval CNS3 ± 10 of 4 1.79None
Larval Salivary gland4 ± 20 of 4 2.47None
Larval midgut1 ± 00 of 4 0.57None
Larval tubule2 ± 10 of 4 1.60None
Larval hindgut4 ± 10 of 4 2.52None
Larval fat body1 ± 00 of 4 0.90None
Larval trachea1 ± 00 of 4 0.53None
Larval carcass1 ± 00 of 4 0.91None
S2 cells (growing)2 ± 10 of 4 1.35None
Whole fly1 ± 00 of 4

Looking for FBgn0034770. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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