Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034827 through 18771 annotations produced 1 hits



Klp59D (Klp59D):

Annotation Number : CG12192
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034827
Gbrowse : chr2R:19029521-19031878 (+) // 100.0 //
Probeset : 1624329_at
Accessions : protein= NP_611762;, nucleotide= NM_137918;
Pathway : 0005871 // kinesin complex // inferred from sequence or structural similarity /// 0005874 // microtubule // inferred fro
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequ
FlyMine data for FBgn0034827.
Homophila reports that CG12192 is a close match (6e-31) to human gene KIF5A;NKHC;SPG10 (NP_004975), a gene associated with Spastic paraplegia 10, 604187 (3).
BioGrid reports that CG12192 interacts with CG7928 .
TRiP has 1 RNAi stocks for FBgn0034827 available for purchase.
VDRC has 3 RNAi stocks for FBgn0034827 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 00 of 4 0.00Down
Head5 11 of 4 0.10Down
Eye1 00 of 4 0.02Down
Thoracicoabdominal ganglion5 11 of 4 0.10Down
Salivary gland10 10 of 4 0.13Down
Crop2 10 of 4 0.00Down
Midgut8 11 of 4 0.10Down
Tubule5 00 of 4 0.10Down
Hindgut6 10 of 4 0.10Down
Heart2 10 of 4 0.04Down
Fat body8 51 of 4 0.10Down
Ovary2 00 of 4 0.00Down
Testis1168 284 of 414.40Up
Male accessory glands8 10 of 4 0.10Down
Virgin spermatheca3 10 of 4 0.05Down
Mated spermatheca3 00 of 4 0.04Down
Adult carcass15 20 of 4 0.20Down
Larval CNS3 20 of 4 0.05Down
Larval Salivary gland3 20 of 4 0.04Down
Larval midgut6 11 of 4 0.08Down
Larval tubule3 11 of 4 0.00Down
Larval hindgut4 00 of 4 0.06Down
Larval fat body150 824 of 4 1.90None
Larval trachea3 51 of 4 0.05Down
Larval carcass4 00 of 4 0.06Down
S2 cells (growing)2 10 of 4 0.03Down
Whole fly80 34 of 4

Looking for FBgn0034827. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime