Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034842 through 18771 annotations produced 1 hits



Prosbeta5R1 (Prosbeta5R):

Annotation Number : CG9868
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034842
Gbrowse : chr2R:19196176-19197339 (-) // 100.0 //
Probeset : 1631025_at
Accessions : protein= NP_611776;, nucleotide= NM_137932;
Pathway : 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic
Interpro : 0004175 // endopeptidase activity // inferred from sequence or structural similarity /// 0004175 // endopeptidase activi
FlyMine data for FBgn0034842.
VDRC has 4 RNAi stocks for FBgn0034842 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head0 ± 00 of 4 0.00Down
Eye0 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland5 ± 20 of 4 0.09Down
Crop1 ± 00 of 4 0.00Down
Midgut0 ± 00 of 4 0.00Down
Tubule1 ± 00 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart0 ± 00 of 4 0.01Down
Fat body0 ± 00 of 4 0.01Down
Ovary2 ± 00 of 4 0.00Down
Testis835 ± 304 of 415.20Up
Male accessory glands0 ± 00 of 4 0.00Down
Virgin spermatheca1 ± 00 of 4 0.02Down
Mated spermatheca0 ± 00 of 4 0.01Down
Adult carcass4 ± 10 of 4 0.10Down
Larval CNS0 ± 00 of 4 0.01Down
Larval Salivary gland0 ± 00 of 4 0.01Down
Larval midgut1 ± 00 of 4 0.03Down
Larval tubule0 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.02Down
Larval fat body56 ± 313 of 4 1.00None
Larval trachea1 ± 20 of 4 0.03Down
Larval carcass1 ± 00 of 4 0.04Down
S2 cells (growing)0 ± 00 of 4 0.01Down
Whole fly55 ± 14 of 4

Looking for FBgn0034842. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime