Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034897 through 18771 annotations produced 1 hits



sestrin (Sesn):

Annotation Number : CG11299
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034897
Gbrowse : chr2R:19601443-19620709 (+) // 100.0 //
Probeset : 1635678_at
Accessions : protein= NP_001097437; /// NP_001097438; /// NP_611821;, nucleotide= NM_001103967; /// NM_001103968; /// NM_137977;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0034897.
BDGP gene expression has embryonic in situ data for CG11299: 4 pix of staining in 1 body parts.
BioGrid reports that CG11299 interacts with CG13951 CG7958 CG8200 CG9081 CG9842 CG15080 CG17107 CG17826 Dmel CR14499 .
VDRC has 2 RNAi stocks for FBgn0034897 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain79 64 of 4 0.50Down
Head177 74 of 4 1.10None
Eye347 494 of 4 2.14Up
Thoracicoabdominal ganglion77 34 of 4 0.50Down
Salivary gland26 43 of 4 0.16Down
Crop518 304 of 4 3.20Up
Midgut115 64 of 4 0.70Down
Tubule671 194 of 4 4.10Up
Hindgut240 104 of 4 1.50Up
Heart330 324 of 4 2.04Up
Fat body298 344 of 4 1.84Up
Ovary294 34 of 4 1.80Up
Testis17 24 of 4 0.10Down
Male accessory glands37 44 of 4 0.20Down
Virgin spermatheca293 464 of 4 1.81None
Mated spermatheca198 104 of 4 1.22None
Adult carcass317 144 of 4 2.00Up
Larval CNS51 44 of 4 0.32Down
Larval Salivary gland52 54 of 4 0.32Down
Larval midgut214 204 of 4 1.32None
Larval tubule595 574 of 4 3.70Up
Larval hindgut483 304 of 4 2.98Up
Larval fat body249 324 of 4 1.50None
Larval trachea29 54 of 4 0.18Down
Larval carcass263 484 of 4 1.63None
S2 cells (growing)126 94 of 4 0.78None
Whole fly162 134 of 4

Looking for FBgn0034897. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime