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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0034967 through 18771 annotations produced 1 hits



anon-fast-evolving-2H10 (eIF-5A):

Annotation Number : CG3186
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034967
Gbrowse : chr2R:19945346-19947002 (+) // 100.0 //
Probeset : 1638349_s_at
Accessions : protein= NP_611878; /// NP_726411;, nucleotide= NM_138034; /// NM_166654;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // n
FlyMine data for FBgn0034967.
BDGP gene expression has embryonic in situ data for eIF-5A: 4 pix of staining in 1 body parts.
BioGrid reports that CG3186 interacts with CG9181 CG32201 CG5149 CG6522 CG11420 .
VDRC has 1 RNAi stocks for FBgn0034967 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1591 ± 294 of 4 0.50Down
Head3413 ± 984 of 4 1.00None
Eye4426 ± 1274 of 4 1.32Up
Thoracicoabdominal ganglion2109 ± 214 of 4 0.60Down
Salivary gland8761 ± 3084 of 4 2.62Up
Crop5010 ± 2924 of 4 1.50Up
Midgut3774 ± 1104 of 4 1.10None
Tubule4956 ± 764 of 4 1.50Up
Hindgut3816 ± 634 of 4 1.10Up
Heart5552 ± 3234 of 4 1.66Up
Fat body5368 ± 6764 of 4 1.60Up
Ovary3140 ± 374 of 4 0.90None
Testis1676 ± 494 of 4 0.50Down
Male accessory glands7318 ± 1554 of 4 2.20Up
Virgin spermatheca4731 ± 1554 of 4 1.41Up
Mated spermatheca4837 ± 764 of 4 1.44Up
Adult carcass4700 ± 2084 of 4 1.40Up
Larval CNS2704 ± 1494 of 4 0.81Down
Larval Salivary gland7920 ± 2484 of 4 2.37Up
Larval midgut4077 ± 994 of 4 1.22Up
Larval tubule4984 ± 574 of 4 1.50Up
Larval hindgut4211 ± 634 of 4 1.26Up
Larval fat body6895 ± 7524 of 4 2.10Up
Larval trachea4917 ± 2054 of 4 1.47Up
Larval carcass4294 ± 2354 of 4 1.28Up
S2 cells (growing)4041 ± 254 of 4 1.21Up
Whole fly3348 ± 1434 of 4

Looking for FBgn0034967. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime