FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035024 through 18771 annotations produced 1 hits

(CG11414):

Annotation Number : CG11414
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035024
Gbrowse : chr2R:20449150-20452589 (+) // 100.0 //
Probeset : 1631406_at
Accessions : protein= NP_611932;, nucleotide= NM_138088;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0035024.
VDRC has 2 RNAi stocks for FBgn0035024 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	138 ± 1	4 of 4	0.70	Down
Head	145 ± 4	4 of 4	0.70	Down
Eye	107 ± 4	4 of 4	0.52	Down
Thoracicoabdominal ganglion	153 ± 4	4 of 4	0.70	Down
Salivary gland	441 ± 16	4 of 4	2.12	Up
Crop	253 ± 6	4 of 4	1.20	Up
Midgut	159 ± 3	4 of 4	0.80	Down
Tubule	167 ± 1	4 of 4	0.80	Down
Hindgut	160 ± 1	4 of 4	0.80	Down
Heart	158 ± 1	4 of 4	0.76	Down
Fat body	227 ± 14	4 of 4	1.09	None
Ovary	323 ± 7	4 of 4	1.60	Up
Testis	300 ± 8	4 of 4	1.40	Up
Male accessory glands	400 ± 14	4 of 4	1.90	Up
Virgin spermatheca	209 ± 6	4 of 4	1.01	None
Mated spermatheca	209 ± 6	4 of 4	1.01	None
Adult carcass	180 ± 7	4 of 4	0.90	None
Larval CNS	199 ± 7	4 of 4	0.96	None
Larval Salivary gland	339 ± 8	4 of 4	1.63	Up
Larval midgut	148 ± 8	4 of 4	0.72	Down
Larval tubule	198 ± 5	4 of 4	1.00	None
Larval hindgut	176 ± 1	4 of 4	0.85	Down
Larval fat body	233 ± 7	4 of 4	1.10	None
Larval trachea	107 ± 26	4 of 4	0.52	Down
Larval carcass	199 ± 5	4 of 4	0.96	None
S2 cells (growing)	316 ± 8	4 of 4	1.52	Up
Whole fly	207 ± 9	4 of 4

Looking for FBgn0035024. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720