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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035024 through 18771 annotations produced 1 hits



(CG11414):

Annotation Number : CG11414
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035024
Gbrowse : chr2R:20449150-20452589 (+) // 100.0 //
Probeset : 1631406_at
Accessions : protein= NP_611932;, nucleotide= NM_138088;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0035024.
VDRC has 2 RNAi stocks for FBgn0035024 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain138 14 of 4 0.70Down
Head145 44 of 4 0.70Down
Eye107 44 of 4 0.52Down
Thoracicoabdominal ganglion153 44 of 4 0.70Down
Salivary gland441 164 of 4 2.12Up
Crop253 64 of 4 1.20Up
Midgut159 34 of 4 0.80Down
Tubule167 14 of 4 0.80Down
Hindgut160 14 of 4 0.80Down
Heart158 14 of 4 0.76Down
Fat body227 144 of 4 1.09None
Ovary323 74 of 4 1.60Up
Testis300 84 of 4 1.40Up
Male accessory glands400 144 of 4 1.90Up
Virgin spermatheca209 64 of 4 1.01None
Mated spermatheca209 64 of 4 1.01None
Adult carcass180 74 of 4 0.90None
Larval CNS199 74 of 4 0.96None
Larval Salivary gland339 84 of 4 1.63Up
Larval midgut148 84 of 4 0.72Down
Larval tubule198 54 of 4 1.00None
Larval hindgut176 14 of 4 0.85Down
Larval fat body233 74 of 4 1.10None
Larval trachea107 264 of 4 0.52Down
Larval carcass199 54 of 4 0.96None
S2 cells (growing)316 84 of 4 1.52Up
Whole fly207 94 of 4

Looking for FBgn0035024. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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