FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035111 through 18771 annotations produced 1 hits

(CG16940):

Annotation Number : CG16940
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035111
Gbrowse : chr3L:212274-216479 (+) // 99.89 //
Probeset : 1636520_s_at
Accessions : protein= NP_612012; /// NP_728490; /// NP_728491;, nucleotide= NM_138168; /// NM_167805; /// NM_167806;
Pathway : 0000176 // nuclear exosome (RNase complex) // inferred from sequence or structural similarity /// 0000177 // cytoplasmic
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from elec
FlyMine data for FBgn0035111.
BDGP gene expression has embryonic in situ data for CG16940: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0035111 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	166 ± 2	4 of 4	0.80	Down
Head	119 ± 5	4 of 4	0.60	Down
Eye	128 ± 14	4 of 4	0.63	Down
Thoracicoabdominal ganglion	150 ± 4	4 of 4	0.70	Down
Salivary gland	160 ± 7	4 of 4	0.79	Down
Crop	167 ± 4	4 of 4	0.80	Down
Midgut	94 ± 5	4 of 4	0.50	Down
Tubule	86 ± 1	4 of 4	0.40	Down
Hindgut	126 ± 1	4 of 4	0.60	Down
Heart	129 ± 3	4 of 4	0.64	Down
Fat body	110 ± 5	4 of 4	0.54	Down
Ovary	438 ± 3	4 of 4	2.20	Up
Testis	357 ± 9	4 of 4	1.80	Up
Male accessory glands	215 ± 13	4 of 4	1.10	None
Virgin spermatheca	134 ± 8	4 of 4	0.67	Down
Mated spermatheca	168 ± 11	4 of 4	0.83	None
Adult carcass	92 ± 5	4 of 4	0.50	Down
Larval CNS	208 ± 8	4 of 4	1.03	None
Larval Salivary gland	245 ± 16	4 of 4	1.21	None
Larval midgut	87 ± 7	4 of 4	0.43	Down
Larval tubule	129 ± 2	4 of 4	0.60	Down
Larval hindgut	143 ± 3	4 of 4	0.71	Down
Larval fat body	183 ± 22	4 of 4	0.90	None
Larval trachea	213 ± 8	4 of 4	1.05	None
Larval carcass	115 ± 8	4 of 4	0.57	Down
S2 cells (growing)	205 ± 4	4 of 4	1.01	None
Whole fly	202 ± 7	4 of 4

Looking for FBgn0035111. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720